Detailed information on CNT30314202


BLAST search results

BLAST vs Swiss-Prot:
sp|P31167|ADT1_ARATH, E-value = 4e-79

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618446Camelina sativaSesamum indicum51.98.3784.39205forward
CNT3020919Camelina sativaCitrullus lanatus37.2218.3185.71147forward
CNT30162003Camelina sativaPistacia vera33.1627.5285.5131forward
CNT30441966Camelina sativaAegilops tauschii39.2443.5488.39155forward
CNT30253145Camelina sativaAvena sativa29.3737.5491.38116forward
CNT3041636Camelina sativaChlamydomonas reinhardtii18.2326.1887.572forward
CNT30715236Camelina sativaMalus domestica golden27.5919.5385.32109forward
CNT30355032Camelina sativaLactuca sativa27.8513.4588.18110forward
CNT30426944Camelina sativaPapaver somniferum46.5861.5486.41184forward
CNT30329515Camelina sativaDioscorea rotundata40.2520.8184.91159forward
CNT30724403Camelina sativaLupinus angustifolius37.474087.84148forward

Expression of CNT30314202

Peptides detected in this lncRNA

>peptide 1 (94 aa)
KPSSFTVLPKQSPIPLYGSESLPALIISSWFWIKSLTRSMGAAAVFETAAETPPIRKSRAKLVNPFSPGAWTKTGEAAVANILDVGGNWNAALE*

>peptide 2 (46 aa)
KTFILHCPAETVTNTLVWLREPASFNHLILVLDQKLNTLNGSSSSL*

>peptide 3 (30 aa)
MPLVHRRPLVSRFLRNSGVLNLINHFELCKI

Sequence

>CNT30314202
AAAACCTTCATCCTTCACTGTCCTGCCGAAACAGTCACCAATACCCTTGTATGGCTCAGAGAGCCTGCCAGCTTTAATCATCTCATCCTGGTTCTGGATC
AAAAGCTTAACACGCTCAATGGGAGCAGCAGCAGTCTTTGAGACGGCAGCAGAAACACCACCCATCAGAAAGTCAAGAGCAAAGTTGGTGAACCCTTTCT
CTCCTGGAGCCTGGACAAAGACTGGAGAAGCAGCTGTGGCCAACATCCTGGATGTGGGAGGAAACTGGAATGCAGCATTGGAGTAGTTTCCATAGGTTGC
ATGCCTCTGGTACATAGAAGGCCTCTGGTAAGCAGATTTCTGCGCAATAGTGGGGTGCTGAACTTGATCAACCATTTTGAACTCTGCAAAATTAC