« Back to Chlamydomonas reinhardtii search


Detailed information on CNT3041636


BLAST search results

BLAST vs Swiss-Prot:
sp|P25083|ADT1_SOLTU, E-value = 8e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618446Chlamydomonas reinhardtiiSesamum indicum20.362.2989.2956forward
CNT3020944Chlamydomonas reinhardtiiCitrullus lanatus24.7316.3586.7668forward
CNT30162003Chlamydomonas reinhardtiiPistacia vera26.1815.1386.1172forward
CNT30441966Chlamydomonas reinhardtiiAegilops tauschii25.0919.3892.7569forward
CNT30253145Chlamydomonas reinhardtiiAvena sativa26.1823.387.572forward
CNT30314202Chlamydomonas reinhardtiiCamelina sativa26.1818.2387.572forward
CNT30355032Chlamydomonas reinhardtiiLactuca sativa248.0786.3666forward
CNT30329500Chlamydomonas reinhardtiiDioscorea rotundata2411.3287.8866forward

Expression of CNT3041636

Peptides detected in this lncRNA

>peptide 1 (90 aa)
LGGEVANHVGGVAAPQRAKTLLADGAHEALADALVGGSQAALLDHLILVLDQQLHTLNRRGSCLGHGTNDATTRQRGSGMGKHRWEWGELR

>peptide 2 (43 aa)
PGWGSSESRWRCCRATASQNPPRGRCARSTRRCPCRGKPGGPA*

Sequence

>CNT3041636
CCTGGGTGGGGAAGTAGCGAATCACGTTGGCGGTGTTGCCGCGCCACAGCGAGCCAAAACCCTCCTCGCGGACGGTGCGCACGAAGCACTCGCCGATGCC
CTTGTAGGGGGAAGCCAGGCGGCCCTGCTTGATCATCTCATCCTGGTTCTGGATCAGCAGCTTCACACGCTCAATAGGCGCGGCAGCTGTCTTGGACACG
GCACCAACGACGCTACGACGCGCCAGAGGGGAAGTGGTATGGGCAAACACCGCTGGGAATGGGGCGAGTTGAGGC