Detailed information on CNT30267763


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000794, E-value = 9e-49

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316118Chenopodium quinoaCorylus avellana56.6755.3282.28395forward
CNT30710467Chenopodium quinoaGlycine max59.6857.5480.53416forward
CNT30559586Chenopodium quinoaActinidia chinensis42.0436.3182.59293forward
CNT3088022Chenopodium quinoaVigna radiata49.0779.1780.41342forward
CNT30312132Chenopodium quinoaCamelina sativa52.3756.3381.37365forward
CNT3076593Chenopodium quinoaBrassica juncea63.1380.5980.91440forward
CNT30263629Chenopodium quinoaBrassica rapa57.5369.9881.05401forward
CNT30141877Chenopodium quinoaLolium perenne38.5960.0485.5269forward
CNT30216750Chenopodium quinoaKalanchoe fedtschenkoi45.4864.6981.7317forward
CNT30648676Chenopodium quinoaRosa chinensis56.6753.0281.52395forward
CNT30205421Chenopodium quinoaHelianthus annuus38.1649.9183.83266forward
CNT30681212Chenopodium quinoaTriticum urartu34.7251.3883.47242forward
CNT30574226Chenopodium quinoaVitis vinifera50.0769.9482.52349forward
CNT30705859Chenopodium quinoaPrunus avium55.8152.0780.46389forward
CNT30642027Chenopodium quinoaCannabis sativa50.6555.3380.17353forward

Expression of CNT30267763

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MMEMWGCKMEMWGCMMEMSGCTTEMSGCRLEMSGCKLETWGCRLEMWGCSLERWGCS*

>peptide 2 (89 aa)
MWGYSLVRWESKMGLWVNMPGLLDYSQETQDCKSGKLDYIQERLDYILEKLGYILEKWGCNQVNLVRDKQEMKQERRPCRQQMEKMKHH*

>peptide 3 (50 aa)
MSDIWAKQVARRHHTLMVRCSRNGRPSRCHPKFQAFHITWKVDFNSMLQHF

Sequence

>CNT30267763
GCTATAACTTGGTGATGTAGGGCTATATCCTGGAGATGTAGGGCTGTAAGCAGGAGATGTAGGGCTGTACGATGGAGAAGTAGGGCTGTATGATGGAGAT
GTGGGGCTGTAAGATGGAGATGTGGGGCTGTATGATGGAGATGTCGGGCTGTACGACGGAGATGTCGGGCTGTAGGCTGGAGATGTCGGGCTGTAAGCTG
GAGACGTGGGGCTGTAGGCTGGAGATGTGGGGCTGTAGCTTGGAGAGGTGGGGCTGTAGCTAGGAGATGTGGGGCTATAGCTTGGTGAGGTGGGAGAGTA
AGATGGGCTTGTGGGTGAATATGCCGGGCTTGTTGGACTATAGCCAGGAGACCCAGGACTGTAAGTCGGGGAAGTTGGACTATATCCAGGAGAGGTTGGA
CTATATCCTGGAGAAGTTGGGCTATATCCTGGAGAAGTGGGGCTGTAACCAGGTGAATTTGGTGAGAGATAAGCAGGAGATGAAGCAGGAGAGAAGGCCA
TGCCGCCAACAAATGGAGAAAATGAAGCATCATTGATGGGCGAATGTCGGATATTTGGGCTAAGCAAGTAGCTAGGAGACATCATACTCTCATGGTAAGG
TGTTCCAGAAATGGGCGACCGAGCAGGTGTCATCCCAAATTCCAAGCCTTCCACATAACTTGGAAGGTGGACTTCAATAGCATGCTGCAACATTTCC