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Detailed information on CNT30205421


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000794, E-value = 6e-34

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30267763Helianthus annuusChenopodium quinoa49.9138.1683.83266forward
CNT30403468Helianthus annuusBeta vulgaris45.9731.6581.63245forward
CNT30366979Helianthus annuusSorghum bicolor56.148.9482.27299forward
CNT30354836Helianthus annuusLactuca sativa72.4266.984.72386forward
CNT30335475Helianthus annuusCynara cardunculus102.8142.1985.22548forward

Expression of CNT30205421

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVKWGCRMGRSGCTLGMSGCMLGMSGCRQET*

Sequence

>CNT30205421
CGGGCTATATGGACTTGAAGGTGACAGCCTCGGACTGCTAGGGGAATAAGCAAGAGAGGGGCTGTACTTGGCAGATGACGGATTGTAACTTGGTGAGGTT
GGGCTGTAGCTTGGTGAAGTTGGGCTGTAGCTAGGCGAAGTTGGACTGTAGCCAGGAGAAGTCGGGCTGTAAGCAGGTGAGGTGGGGCTGTAGGATGGAG
AGGTAGGGCTGTAGGATGGAGAGGTGGGGCTGTATGATGGGGAGGTAGGGCTGTAGGATGGTGAAGTGGGGCTGTAGGATGGGGAGGTCGGGCTGTACGC
TGGGGATGTCGGGCTGTATGCTGGGGATGTCGGGCTGTAGGCAGGAGACGTAGGGCTGTAACTAGGTGACGTGGGTGAGTAACTGGGAGATGTGGGGGAG
TAGCTAGGTGAGGTGGGAGAATAGCTGGGAGAAGTCGGGGAGTACGTAGGACTGGTTGGACTATAGCCAGGGGAACTTGGACTATACGTTGGTGAAGTGG
GACTATAACCAGGTGATGTAGGGCTATAACCGG