CNCI status: | # |
Max. peptide length: | # |
Is conserved: | # |
Organ specific: | # |
Max. expression: | # |
No. of exons: | # |
Order by: | lncRNA ID |
Record details | CANTATAdb ID | Species | Location | CNCI status (score) | Swiss-Prot best hit | Max. peptide length | Max. expression | No. of exons | Additional notes |
---|---|---|---|---|---|---|---|---|---|
CNT30521086 | Setaria italica | III:10926777-10934751 (+) | noncoding (-0.053248) | - | 65 | 6.15 | 4 | ||
CNT30521081 | Setaria italica | III:50374927-50376915 (+) | coding (0.31) | 3e-91 (sp|Q9SIV9|PPA10_ARATH) | 86 | 0.39 | 3 | Conserved counterparts: CNT30449700 Expressed preferentially in root |
|
CNT30521075 | Setaria italica | III:24069437-24069903 (-) | coding (0.08) | 3e-45 (sp|P05348|RBS_MAIZE) | 80 | 0.48 | 2 | Expressed preferentially in root | |
CNT30521074 | Setaria italica | III:19527171-19527656 (+) | noncoding (-0.0004096) | - | 43 | 0 | 2 | ||
CNT30521073 | Setaria italica | III:50374927-50376915 (+) | coding (0.317) | 7e-95 (sp|Q9SIV9|PPA10_ARATH) | 86 | 1.43 | 3 | Conserved counterparts: CNT30449700 Expressed preferentially in root |
|
CNT30521070 | Setaria italica | III:24102022-24102839 (-) | noncoding (-0.077824) | - | - | 0.38 | 3 | Expressed preferentially in root | |
CNT30521069 | Setaria italica | III:35364501-35365029 (+) | coding (0.267) | - | 91 | 62.04 | 2 | Expressed preferentially in root | |
CNT30521067 | Setaria italica | III:29168231-29171162 (-) | coding (0.118) | - | 51 | 4.9 | 3 | Expressed preferentially in leaf | |
CNT30521066 | Setaria italica | III:5573849-5574452 (+) | noncoding (-0.049152) | 4e-41 (sp|Q02028|HSP7S_PEA) | 98 | 16.07 | 2 | ||
CNT30521062 | Setaria italica | III:7948630-7949902 (+) | noncoding (-0.0004096) | - | 97 | 33.45 | 3 | ||
CNT30521061 | Setaria italica | III:23406417-23426401 (+) | noncoding (-0.0303104) | 4e-146 (sp|O64937|EF1A_ORYSJ) | 97 | 118.73 | 3 | Conserved counterparts: CNT3020462 Expressed preferentially in leaf |
|
CNT30521060 | Setaria italica | III:26859375-26860161 (-) | noncoding (-0.0200704) | - | 89 | 0 | 2 | Expressed preferentially in root | |
CNT30521059 | Setaria italica | III:50403484-50438928 (+) | noncoding (-0.151552) | - | 89 | 2.51 | 2 | ||
CNT30521057 | Setaria italica | III:10746567-10747389 (+) | noncoding (-0.0876544) | - | 34 | 1.16 | 2 | Expressed preferentially in root | |
CNT30521054 | Setaria italica | III:50374975-50376609 (+) | coding (0.362) | 6e-146 (sp|Q9SDZ9|PPAF2_IPOBA) | 86 | 0.19 | 4 | Conserved counterparts: CNT30449700 Expressed preferentially in root |
|
CNT30521052 | Setaria italica | III:2612872-2618477 (-) | noncoding (-0.028672) | - | 90 | 6.39 | 4 | ||
CNT30521051 | Setaria italica | III:23438301-23451606 (+) | coding (0.18) | - | 92 | 5.44 | 2 | ||
CNT30521047 | Setaria italica | III:1322085-1322664 (-) | coding (0.166) | 1e-61 (sp|Q7XPY2|PMA1_ORYSJ) | 96 | 1.56 | 2 | Conserved counterparts: CNT30693272 | |
CNT30521045 | Setaria italica | III:779904-781170 (+) | coding (0.322) | 3e-97 (sp|Q7XKF3|PORA_ORYSJ) | 90 | 0.52 | 3 | Conserved counterparts: CNT30131011 Expressed preferentially in leaf |
|
CNT30521044 | Setaria italica | III:4103181-4104541 (-) | noncoding (-0.0483328) | - | 93 | 4.25 | 2 | ||
CNT30521042 | Setaria italica | III:45613813-45614554 (+) | coding (0.128) | - | 86 | 8.95 | 2 | ||
CNT30521040 | Setaria italica | III:6178498-6179619 (+) | coding (0.35) | - | 57 | 15.92 | 1 | Conserved counterparts: CNT305028 | |
CNT30521039 | Setaria italica | III:16300907-16301170 (+) | noncoding (-0.0004096) | - | - | 2.32 | 2 | ||
CNT30521038 | Setaria italica | III:8424806-8431067 (-) | coding (0.242) | - | 79 | 4.02 | 10 | Conserved counterparts: CNT30472871 Expressed preferentially in root |
|
CNT30521036 | Setaria italica | III:42045744-42046064 (-) | noncoding (-0.0004096) | - | 35 | 2.44 | 1 | ||
CNT30521035 | Setaria italica | III:34153985-34159760 (-) | noncoding (-0.0487424) | - | 61 | 7.86 | 5 | Expressed preferentially in leaf | |
CNT30521034 | Setaria italica | III:8285422-8285796 (-) | coding (0.192) | 7e-63 (sp|Q6L4S3|HIRL1_ORYSJ) | 91 | 0 | 2 | Conserved counterparts: CNT30471513 | |
CNT30521032 | Setaria italica | III:21432255-21433570 (-) | coding (0.243) | 3e-36 (sp|Q6ATY4|U603_ORYSJ) | 88 | 0.09 | 2 | Conserved counterparts: CNT3013983 | |
CNT30521030 | Setaria italica | III:35159848-35161070 (+) | coding (0.194) | 2e-56 (sp|P23993|PSAL_HORVU) | 59 | 14.63 | 3 | Conserved counterparts: CNT304588, CNT30712288 Expressed preferentially in root |
|
CNT30521029 | Setaria italica | III:48411322-48411649 (+) | noncoding (-0.08192) | 2e-32 (sp|F4JIF4|NET1B_ARATH) | 76 | 2.88 | 1 | ||
CNT30521028 | Setaria italica | III:2834857-2835474 (-) | noncoding (-0.0544768) | - | 83 | 4.8 | 2 | Conserved counterparts: CNT30470463 | |
CNT30521027 | Setaria italica | III:11432725-11433438 (+) | coding (0.179) | 0.000000000005 (sp|P82353|NLTP2_PRUAR) | - | 1043.86 | 2 | Expressed preferentially in root | |
CNT30521026 | Setaria italica | III:14734155-14734595 (+) | coding (0.364) | - | 86 | 1.47 | 2 | Conserved counterparts: CNT30115543 | |
CNT30521023 | Setaria italica | III:6178498-6179619 (+) | noncoding (-0.0876544) | - | 57 | 6.7 | 2 | Conserved counterparts: CNT306279 | |
CNT30521022 | Setaria italica | III:50374914-50376915 (+) | coding (0.321) | 2e-114 (sp|Q9SIV9|PPA10_ARATH) | 86 | 11.04 | 2 | Conserved counterparts: CNT30449700 Expressed preferentially in root |
|
CNT30521020 | Setaria italica | III:2612912-2618491 (-) | noncoding (-0.016384) | - | 90 | 3.25 | 5 | ||
CNT30521017 | Setaria italica | III:16905904-16906353 (-) | noncoding (-0.0004096) | - | 32 | 13.53 | 1 | ||
CNT30521015 | Setaria italica | III:7447589-7448472 (+) | coding (0.49) | - | 74 | 3.71 | 2 | Conserved counterparts: CNT30101767 Expressed preferentially in stem |
|
CNT30521012 | Setaria italica | III:38100114-38100717 (+) | noncoding (-0.053248) | 1e-29 (sp|P05348|RBS_MAIZE) | 30 | 1.26 | 2 | Conserved counterparts: CNT30578557, CNT30597241, CNT30118102 Expressed preferentially in root |
|
CNT30521011 | Setaria italica | III:21266402-21266692 (-) | coding (0.577) | 3e-42 (sp|Q42368|PPDK2_MAIZE) | 82 | 6.29 | 2 | Conserved counterparts: CNT3011050 Expressed preferentially in root |
|
CNT30521010 | Setaria italica | III:23406464-23426637 (+) | coding (0.112) | 0 (sp|O64937|EF1A_ORYSJ) | 97 | 74.18 | 2 | Conserved counterparts: CNT3020462 Expressed preferentially in leaf |
|
CNT30521009 | Setaria italica | III:19028102-19028731 (+) | noncoding (-0.196608) | - | 88 | 4.84 | 1 | Expressed preferentially in leaf | |
CNT30521006 | Setaria italica | III:7382865-7394251 (+) | noncoding (-0.069632) | - | 39 | 0.51 | 2 | ||
CNT30521002 | Setaria italica | III:12772881-12773331 (-) | noncoding (-0.0151552) | - | 47 | 5862.06 | 1 | Conserved counterparts: CNT30577776, CNT30104648, CNT3081478, CNT3016498 Expressed preferentially in leaf |
|
CNT30520998 | Setaria italica | III:4009174-4009618 (-) | noncoding (-0.0684032) | - | 69 | 164.69 | 2 | Conserved counterparts: CNT30473612 | |
CNT30520997 | Setaria italica | III:11503956-11504276 (-) | noncoding (-0.02048) | - | 43 | 3.97 | 1 | ||
CNT30520996 | Setaria italica | III:23406414-23426596 (+) | noncoding (-0.0495616) | 8e-153 (sp|O64937|EF1A_ORYSJ) | 97 | 0 | 4 | Conserved counterparts: CNT3011166, CNT3020462 Expressed preferentially in leaf |
|
CNT30520995 | Setaria italica | III:50374932-50376924 (+) | coding (0.314) | 0.00000000003 (sp|Q9SI18|PPA11_ARATH) | 86 | 0.76 | 3 | Conserved counterparts: CNT30449700 Expressed preferentially in root |
|
CNT30520994 | Setaria italica | III:23406417-23426401 (+) | noncoding (-0.0323584) | - | 97 | 0.4 | 3 | Conserved counterparts: CNT3011166, CNT3020462 Expressed preferentially in leaf |
|
CNT30520993 | Setaria italica | III:10746567-10747398 (+) | coding (0.296) | - | 39 | 1.01 | 3 | Expressed preferentially in root |