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Detailed information on CNT30712288

BLAST search results

BLAST vs Swiss-Prot:
sp|Q39654|PSAL_CUCSA, E-value = 4e-70

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30672414	Glycine max	Setaria viridis	24.61	23.67	85.21	142	forward
CNT30520781	Glycine max	Setaria italica	24.61	22.05	85.21	142	forward
CNT30730016	Glycine max	Corchorus capsularis	31.02	27.04	83.24	179	forward
CNT3042792	Glycine max	Prunus dulcis	24.61	38.48	86.62	142	forward
CNT30182270	Glycine max	Secale cereale	24.61	25.72	82.39	142	forward
CNT30294278	Glycine max	Triticum aestivum	24.61	32.95	82.39	142	forward
CNT30390478	Glycine max	Triticum turgidum	24.61	11.91	82.39	142	forward
CNT30560479	Glycine max	Actinidia chinensis	28.42	15.57	85.37	164	forward
CNT30249784	Glycine max	Avena sativa	25.13	17.66	81.38	145	forward
CNT30454500	Glycine max	Saccharum spontaneum	25.13	40.06	82.07	145	forward
CNT304795	Glycine max	Zea mays	24.61	31.42	81.69	142	forward
CNT30217087	Glycine max	Kalanchoe fedtschenkoi	21.49	11.93	80.65	124	forward
CNT30720963	Glycine max	Triticum spelta	24.61	25.49	82.39	142	forward
CNT30344813	Glycine max	Eragrostis tef	24.61	27.15	83.1	142	forward
CNT30570425	Glycine max	Vitis vinifera	23.05	7.65	84.21	133	forward
CNT30557050	Glycine max	Panicum hallii	24.61	37.37	85.21	142	forward

Expression of CNT30712288

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MGPPEGSHGPGPPRSLLVVGSLRSCMRGGSISTMQSRGWM*

Sequence

>CNT30712288
AGAGAGAGAATTTAACATTGTAACATGTTGAGAGTCATACAATACATCATTTACATCCATCTCTATTGCACAAATAAGGATCCATTTCCACCCATTGTCC
ATTCATAGAGAATGAATAACAACAAAAAGTAAACAAAGATAATAAGCACTTTCTTCACTTGATGTAGTATGGAAGGTCCAAGACGTAGAGGAGGAAGTAG
GCCCAAATAACACCCGAAATGCCTCCGAAGAAGAAGCCTCCGGTGAACTTGGCCCACCCATCAGCAGTTTGGAGCTGATCGGGCTCCTTCTTGCGGCCCG
TCAAGGTCAGTGACGGGGCAGTGGATGGGCAAAGGCTGAGGATCACCACAAGCCCACCAGCGGCGAGAGAGCCCGCTTGCCCGGCGATCTCGGTGTTCCT
CAGAGGCCCGGCCTTCACGAATGGGCCCACCAGAAGGTAGCCATGGGCCAGGCCCACCTCGATCCCTCTTAGTAGTGGGCTCACTGCGGTCCTGTATGCG
GGGAGGTTCGATAAGTACCATGCAATCAAGGGGCTGGATGTAACTGGGGTTTCAAGGCTTCCAATGAAGGGATCACC