Detailed information on CNT30710856


BLAST search results

BLAST vs Swiss-Prot:
sp|P13951|RBS_SINAL, E-value = 8e-44

BLAST vs NONCODE:
NONCQUT001608, E-value = 2e-35

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317063Glycine maxCorylus avellana17.7231.4983.52182forward
CNT30512567Glycine maxJuglans regia21.6253.1183.33222forward
CNT30372132Glycine maxArabidopsis thaliana22.6936.0779.83233forward
CNT3069740Glycine maxQuercus suber21.7124.6185.2223forward
CNT30525413Glycine maxPhaseolus vulgaris23.1730.6391.18238forward
CNT30629734Glycine maxVigna unguiculata21.6224.9290.09222forward
CNT30166270Glycine maxPistacia vera21.3233.6481.74219forward
CNT30633374Glycine maxCapsicum annuum22.6927.1684.55233forward
CNT3083811Glycine maxVigna radiata21.4216.8788.64220forward
CNT30235546Glycine maxBrassica oleracea22.4927.8380.52231forward
CNT30605276Glycine maxGossypium raimondii17.4345.3283.8179forward
CNT30648517Glycine maxRosa chinensis22.445.184.35230forward
CNT30620550Glycine maxCajanus cajan51.5144.1685.82529forward
CNT3038822Glycine maxCucumis melo21.0348.5485.19216forward
CNT30176139Glycine maxVigna angularis20.5515.789.57211forward
CNT30725197Glycine maxLupinus angustifolius20.1629.3280.68207forward

Expression of CNT30710856

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MEVMSLLVFLVGKPAMDLRPVNGATMPAPARLTVVTAGEEIIEEAISFFLVLNYLFFCCQISKLLLKLAIYNSVICV

>peptide 2 (47 aa)
WKCKDNGFLKLFGNKATQHNSLFISSHPLISIEVRKQKPKIQDDEIS*

>peptide 3 (74 aa)
MLCKFFNDLEAWGLVGDEADALHLANVVKSNDTDEAIGVCSLSLLKLLQHLRSISAAKHRQLPHGPVASIIVSR*

Sequence

>CNT30710856
GATGGAAATGCAAGGACAATGGGTTCTTGAAGTTATTTGGAAACAAAGCAACACAACACAATAGCTTATTCATTAGTTCTCATCCATTAATTTCCATTGA
AGTCCGAAAACAGAAACCAAAAATACAGGATGATGAAATCTCATAAAGCAAAAACAAATGGGAATGTAGTTTAAGTACAACAAACAAAGTGGGGTGGCTA
CAGATGCTTTGCAAATTTTTCAATGACTTAGAAGCCTGGGGGCTTGTAGGCGATGAAGCTGATGCACTGCACTTGGCGAACGTTGTCAAATCCAATGATA
CGGATGAAGCCATTGGGGTATGCAGTCTTAGCCTCTTGAAGCTCCTTCAACACCTGAGAAGCATCAGTGCAGCCAAACATAGGCAGCTTCCACATGGTCC
AGTAGCGTCCATCATAGTATCCAGGTGACCTGTTGTGCTCACGGTACACGAAACCGTGCTATATACAAACACAACAAACATATCAACCATCAAAACTCAA
AACCAAGTGCTTGTTTTGTAATAATAGGGACAGATTTGATCAATATTGATAAGTCTGAGATAGAAAAATCCATTAGATAAACTTAAATTTTGGAAAACAA
CCACTTCTCTTTTTTTTTTTTTTTTTTTTGTTTCCAAAAGTACTTTTAGCACGCCAGCAAGAGAAGCGATTATTTCTTCAAAATAAGTTGAAACAAACTA
AGACTAAGAAACTATAATTAAACCAAAAGGGGTTGCAAGAAATTGACCTCCAACTCGAATTCCAAGCAAGGAATCCATCCTTTCCTTAGAAGCAATGGAG
GTAATGTCATTGTTGGTCTTCCTCGTGGGGAAGCCAGCCATGGATTTGAGGCCGGTGAATGGAGCAACCATGCCGGCACCGGCACGGTTGACGGTGGTAA
CAGCTGGGGAGGAGATCATTGAGGAAGCCATTTCCTTCTTCTTAGTTCTCAACTACTTGTTTTTCTGCTGCCAGATATCCAAGCTTCTGCTCAAACTTGC
TATATATAATAGTGTGATTTGTGTAGT