Detailed information on CNT30525413


BLAST search results

BLAST vs Swiss-Prot:
sp|P00865|RBS1_SOYBN, E-value = 8e-63

BLAST vs NONCODE:
NONCQUT001608, E-value = 5e-26

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629734Phaseolus vulgarisVigna unguiculata28.725.0388.79223forward
CNT30710856Phaseolus vulgarisGlycine max30.3722.9891.1236forward
CNT3083811Phaseolus vulgarisVigna radiata29.0917.3388.94226forward
CNT30605276Phaseolus vulgarisGossypium raimondii24.9749.1181.96194forward
CNT30705707Phaseolus vulgarisPrunus avium24.7117.0485.42192forward
CNT30176139Phaseolus vulgarisVigna angularis28.716.5991.93223forward
CNT30335392Phaseolus vulgarisCynara cardunculus30.1228.7182.48234forward

Expression of CNT30525413

Peptides detected in this lncRNA

>peptide 1 (31 aa)
HKLTIITLSIQFNKFTSNSNSKHGTHPFRRR*

>peptide 2 (36 aa)
MSSLSLVKLLQHLRRISAPKHRQLPHRPVPSIIVSR*

>peptide 3 (53 aa)
MLSTHINIKHKHQHHSFIHSFIHKLTIITLSIQFNKFTSNSNSKHGTHPFRRR*

Sequence

>CNT30525413
TCATAAATTAACCATAATAACCCTTTCAATTCAATTCAACAAATTCACCTCCAATTCGAATTCCAAGCACGGAACCCATCCTTTCCGAAGAAGGTAGTCT
ACTTCCTTTGCCAATTGTTCTTTTGTCAGGGGTGGCAGAACTGTTTTGGAAATTTTGGAGACTTAGTAGCCTGGTGGCTTGTAGGCAATGAAACTGATGC
ACTGCACTTGACGAACGTTGTCAAATCCAATGATACGGATGAAACCATCGGGATGAGCAGTCTGAGCCTCGTAAAGCTCCTTCAACACCTGAGAAGAATC
AGTGCACCCAAACATAGGCAGCTTCCACATCGTCCAGTACCTTCCATCATAGTATCCAGGTGACTTGTTGTGTTCACGGTACACGAAACCATGCTATCAA
CACACATCAACATCAAACACAAACATCAACATCATTCATTCATTCATTCATTCATTCATAAATTAACCATAATAACCCTTTCAATTCAATTCAACAAATT
CACCTCCAATTCGAATTCCAAGCACGGAACCCATCCTTTCCGAAGAAGGTAGTCTACTTCCTTTGCCAATTGTTCTTTTGTCAGGGGTGGCAGTAATATC
ATTGTTCATCTTCCTGCTTGGGAACCCTCCCAGGGACTTCAGCCCAGTGAAAGGAGCCACCATACCGGCACCGGCACCGGCACGGTTAACGGTCGTCACA
GCGGGGGAGGAGATCATTGAAGAAGCCATTTCCTTCTTCTTCTTCTTACTTCTGAATCACTTGCTGTTCTGCTGCTA