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Detailed information on CNT30633374


BLAST search results

BLAST vs Swiss-Prot:
sp|P07398|RBS3_WHEAT, E-value = 1e-42

BLAST vs NONCODE:
NONCQUT001608, E-value = 1e-35

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512567Capsicum annuumJuglans regia25.7652.8781.45221forward
CNT30616445Capsicum annuumSesamum indicum11.1925.4688.5496forward
CNT30279731Capsicum annuumChenopodium quinoa25.6416.8184.55220forward
CNT30727210Capsicum annuumCorchorus capsularis25.768.6181221forward
CNT3069740Capsicum annuumQuercus suber24.7123.480.19212forward
CNT30402284Capsicum annuumBeta vulgaris10.9642.9287.2394forward
CNT30525466Capsicum annuumPhaseolus vulgaris24.3670.3782.78209forward
CNT30629734Capsicum annuumVigna unguiculata23.7822.983.33204forward
CNT30508072Capsicum annuumNicotiana attenuata23.1923.2789.95199forward
CNT30710856Capsicum annuumGlycine max27.1622.6984.55233forward
CNT3091618Capsicum annuumSolanum tuberosum53.3839.5988.21458forward
CNT30508846Capsicum annuumSolanum lycopersicum27.745086.13238forward
CNT30312471Capsicum annuumCamelina sativa26.5730.4479.82228forward
CNT30648517Capsicum annuumRosa chinensis26.8145.184.78230forward
CNT30625551Capsicum annuumDaucus carota24.8313.0480.75213forward
CNT30620550Capsicum annuumCajanus cajan24.0117.282.04206forward
CNT30422416Capsicum annuumPapaver somniferum21.9125.6880.32188forward
CNT30573761Capsicum annuumVitis vinifera8.9720.0589.6177forward
CNT30705707Capsicum annuumPrunus avium20.8615.8884.92179forward
CNT3038822Capsicum annuumCucumis melo25.1748.5481.48216forward
CNT30176139Capsicum annuumVigna angularis22.4914.3682.38193forward
CNT30335392Capsicum annuumCynara cardunculus22.6123.881.96194forward
CNT3039544Capsicum annuumMarchantia polymorpha6.8822.1891.5359forward

Expression of CNT30633374

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MLTSVSNSKQGTHPFRKRYSISLSNCSSDKSGRYERVSYFFLLIGGHTYTHIT*

>peptide 2 (34 aa)
FISPYIIIGAEHKHFIYIYAPEIMSHKVNKQRNK*

>peptide 3 (69 aa)
MENLEAFGLVGDETDTLHLTNVVKSDDTDPGLWVSLLCLLDFIQDLGSISTPEHGQLPHGPVPAIVVSR*

Sequence

>CNT30633374
GTTCATATCGCCTTATATCATAATTGGTGCAGAGCATAAACATTTCATATATATATATGCACCAGAAATCATGTCTCATAAGGTAAATAAGCAAAGAAAC
AAATGATTATTATTATTAGTTCTCATAAACTCAACTGGAATCCAAGAGCATACACTGAATAGAGAAAAGGAAAACAATGGAAAATCAATACAGTTTCTGC
GGGAAAAAACTTGAGGAGGATTTAAACGAGCTTCCCTTAAAGATATAGGGCCAAGTTATACATTAAACATGGAGAATTTAGAAGCCTTCGGGCTTGTAGG
CGATGAAACTGATACACTGCACTTGACGAACGTTGTCAAATCCGATGATACGGATCCAGGCCTGTGGGTAAGCCTTCTTTGCCTCCTGGACTTCATTCAA
GACCTGGGTAGCATCAGTACACCCGAACATGGGCAACTTCCACATGGTCCAGTACCTGCCATCGTAGTATCCAGGTGACCTGTGGTGCTCACGGTACACA
AATCCGTGCTGTACACATCCACAACATCAACATAACATATTACTAATTAGTTGTTATTAATTATCATATATTTTAAGAACAGAGAGATGTTAACCTCAGT
CTCGAATTCCAAACAAGGAACCCATCCCTTTCGCAAAAGGTACTCAATTTCCTTGAGCAATTGCTCGTCGGACAAATCAGGAAGGTATGAAAGAGTCTCG
TACTTCTTCTTGTTAATTGGTGGCCATACCTATACACATATCACGTAAATAATTAGCTAAACAAGCTTCAAGAGAGGAGGTAACACGCTAAATCTAAAAC
AGGGTCAGTGAAATTTATCCTTTCCTATGTACATAATTATATTTGGTGAAATTAAGGC