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Detailed information on CNT30725197


BLAST search results

BLAST vs Swiss-Prot:
sp|Q02980|RBS_MALSP, E-value = 1e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317063Lupinus angustifoliusCorylus avellana26.232.0181.08185forward
CNT30514732Lupinus angustifoliusJuglans regia26.220.8882.7185forward
CNT30372132Lupinus angustifoliusArabidopsis thaliana25.3527.7183.8179forward
CNT30279728Lupinus angustifoliusChenopodium quinoa26.224.9782.16185forward
CNT30727206Lupinus angustifoliusCorchorus capsularis27.058.2985.34191forward
CNT3069740Lupinus angustifoliusQuercus suber27.0521.0882.72191forward
CNT30525466Lupinus angustifoliusPhaseolus vulgaris25.3560.2781.01179forward
CNT30629734Lupinus angustifoliusVigna unguiculata26.220.7681.62185forward
CNT30710856Lupinus angustifoliusGlycine max29.3220.1680.68207forward
CNT30543822Lupinus angustifoliusBrassica napus25.3561.7281.56179forward
CNT30235546Lupinus angustifoliusBrassica oleracea25.3521.5782.12179forward
CNT30312471Lupinus angustifoliusCamelina sativa25.7824.382.97182forward
CNT3059910Lupinus angustifoliusArabidopsis lyrata25.3534.1683.24179forward
CNT3074948Lupinus angustifoliusBrassica juncea24.9325.3281.82176forward
CNT30261239Lupinus angustifoliusBrassica rapa24.9322.2881.25176forward
CNT30613234Lupinus angustifoliusArabis alpina25.7831.9381.87182forward
CNT30605276Lupinus angustifoliusGossypium raimondii25.545.5781.67180forward
CNT30625551Lupinus angustifoliusDaucus carota26.7711.5785.71189forward
CNT30479552Lupinus angustifoliusArabidopsis halleri25.3531.1883.24179forward
CNT30355778Lupinus angustifoliusLactuca sativa27.3424.5581.87193forward
CNT30430736Lupinus angustifoliusPapaver somniferum25.523.0582.78180forward
CNT30705707Lupinus angustifoliusPrunus avium26.3516.583.87186forward
CNT3026569Lupinus angustifoliusPopulus trichocarpa24.545.2983.24173forward
CNT30176139Lupinus angustifoliusVigna angularis25.3513.3280.45179forward
CNT30335392Lupinus angustifoliusCynara cardunculus27.6223.9381.03195forward

Expression of CNT30725197

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MFLLQKCSTKKGKQQGVNTLLENTETKDNNQNIR*

>peptide 2 (49 aa)
MQSWPRPTPSKPVLSLCIQTWEASTLSSTVHHSTLGKSCAHGREPSHCE*

>peptide 3 (40 aa)
MIRMNDLGYAVLASSNSFKTCAESVHPNMGSFHIVQYRPS*

Sequence

>CNT30725197
TTAAGCAAATGAAAATCACCATTTTTTTTCAAAGTCACTCAATCCATCCATCTTACCAGCACAACGCAAATTAACAACAATTTTACTTTGAAAGCATATG
AATGTTTTTGTTACAGAAATGCTCAACGAAAAAAGGAAAGCAACAAGGTGTAAATACACTTTTGGAAAATACTGAAACGAAAGACAATAATCAAAACATT
AGATAGTAGTCTAAGTCTTGAAATTAAAAACCAGGGGGCTTGTATGCAATGAAACTGACACACTGGACTTGACGCTTGTTGTCGAATCCAATGATACGAA
TGAATGATTTAGGGTATGCAGTCTTGGCCTCGTCCAACTCCTTCAAAACCTGTGCTGAGTCTGTGCATCCAAACATGGGAAGCTTCCACATTGTCCAGTA
CCGTCCATCATAGTACCCTGGGGAAGAGTTGTGCTCACGGCAGGGAACCCAGCCATTGCGAATAAGGTAATCAACTTCCTTAGCTAAGGATTCGATGGAG
AGTGGTGGAAGTAATGTCAAGGGTGGACTTCTGTGTAACTGGGAAAGCTGAAGAAGACTTCAACCCTGTGAATGGTGCAACCATGTTACTTTGAACAGGG
GAGACACGGCTAACAGTGGCTACAACTGCAGATGAGACCATTGAAGAAGCCATGCTTCTCTGCTTTCTATATCTTTATGTGCTTTACTGTGTTCAGTTGA
AGAGGT