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Detailed information on CNT30629734


BLAST search results

BLAST vs Swiss-Prot:
sp|P07398|RBS3_WHEAT, E-value = 7e-37

BLAST vs NONCODE:
NONCQUT001608, E-value = 4e-30

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317063Vigna unguiculataCorylus avellana20.231.1481.11180forward
CNT30512567Vigna unguiculataJuglans regia23.5750.2480210forward
CNT30372132Vigna unguiculataArabidopsis thaliana20.8828.7980.65186forward
CNT30616510Vigna unguiculataSesamum indicum21.4413.8481.68191forward
CNT30279728Vigna unguiculataChenopodium quinoa22.927.5383.33204forward
CNT3020258Vigna unguiculataCitrullus lanatus22.2228.0583.33198forward
CNT3069740Vigna unguiculataQuercus suber24.6924.2883.64220forward
CNT30525413Vigna unguiculataPhaseolus vulgaris25.0328.788.79223forward
CNT30508073Vigna unguiculataNicotiana attenuata21.5517.1682.29192forward
CNT30710856Vigna unguiculataGlycine max24.9221.6290.09222forward
CNT30633374Vigna unguiculataCapsicum annuum22.923.7883.33204forward
CNT30605276Vigna unguiculataGossypium raimondii19.8744.8181.36177forward
CNT30648517Vigna unguiculataRosa chinensis22.94082.84204forward
CNT30620550Vigna unguiculataCajanus cajan24.818.4585.97221forward
CNT3038822Vigna unguiculataCucumis melo23.4646.9780.38209forward
CNT30176139Vigna unguiculataVigna angularis41.7527.6889.25372forward
CNT30725197Vigna unguiculataLupinus angustifolius20.7626.281.62185forward

Expression of CNT30629734

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MGIWFKYKQRNKVVVGYKCSRLRSQGPCRQVCQFIKYTKYISIPQD*

>peptide 2 (68 aa)
MSENRNQNYRMVESQKEKTKWEFGLNTNKETKWWWVTNVADLEARGLVGKFVNSLNIPNISPYLKIKL*

>peptide 3 (30 aa)
MGIWFKYKQRNKVVVGYKCSRLRSQGPCRQ*

Sequence

>CNT30629734
CAGCAGCTAATGCATTAATTATCTCATCCATTCATGTCTGAAAACAGAAACCAAAATTACAGGATGGTGGAATCTCAGAAAGAGAAAACGAAATGGGAAT
TTGGTTTAAATACAAACAAAGAAACAAAGTGGTGGTGGGTTACAAATGTAGCAGACTTAGAAGCCAGGGGCCTTGTAGGCAAGTTTGTCAATTCATTAAA
TATACCAAATATATCTCCATACCTCAAGATTAAGCTCTAGCTTTCCACAGAAGATACTCCGGACAACAAAAAGAGAAAACGAAATGGAAATATGGTTTAA
ATACAAACAAAGAAGCAAAGTAGTGGGGGGGTTACAAATGTAGCAGACTTAGAAGCCAGGGGCCTTGTAGGCAATGAAACTGATGCACTGGACTTGACGA
ACGTTGTCGAATCCAATGATACGGACGAAGCCGTTGGGGTGAGCAGTCCTGGCCTCTACAACCTCCTGCAACACCTGAGTAGCATCAGTGCACCCAAACA
TAGGCAGCTTCCACATGGTCCAGTACCTTCCATCATAGTATCCAGGTGACCTGTTTTGCTCACGAAAACGAAATGGGAATATGGTTTAAATACAAACAAA
GAAACAAAGTGGTGGTGGGTTACAAATGTAGCAGACTTAGAAGCCAGGGGCCTTGTAGGCAATGAAACTGATGCACTGGACTTGACGAACGTTGTCGAAT
CCAATGATACGGACGAAGCCGTTGGGGTGAGCAGTCCTGGCCTCTACAACCTCCTGCAACACCTGAGTAGCATCAGTGCACCCAAACATAGGCAGCTTCC
ACATGGTCCAGTACCTTCCATCATAGTATCCAGGTGACCTGTTTTGCTCACGGTATGGGAATGGGTCCTATAAACCAAAAACATCAAATCA