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Detailed information on CNT30176139


BLAST search results

BLAST vs Swiss-Prot:
sp|P00865|RBS1_SOYBN, E-value = 7e-80

BLAST vs NONCODE:
NONCQUT001608, E-value = 1e-24

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512567Vigna angularisJuglans regia7.5924.485.29102forward
CNT30616474Vigna angularisSesamum indicum15.3342.3982.04206forward
CNT30279728Vigna angularisChenopodium quinoa15.1827.5381.86204forward
CNT3020258Vigna angularisCitrullus lanatus14.3627.3481.35193forward
CNT3069740Vigna angularisQuercus suber16.1523.9581.57217forward
CNT30525413Vigna angularisPhaseolus vulgaris16.5928.791.93223forward
CNT30629734Vigna angularisVigna unguiculata27.6841.7589.25372forward
CNT30196843Vigna angularisPisum sativum13.9139.2981.82187forward
CNT30710856Vigna angularisGlycine max15.720.5589.57211forward
CNT30633374Vigna angularisCapsicum annuum14.3622.4982.38193forward
CNT3091655Vigna angularisSolanum tuberosum14.8833.0682.5200forward
CNT3083811Vigna angularisVigna radiata52.0853.6888.14700forward
CNT30543822Vigna angularisBrassica napus4.6921.7288.8963forward
CNT30508846Vigna angularisSolanum lycopersicum14.8141.8182.41199forward
CNT30605275Vigna angularisGossypium raimondii6.1827.3986.7583forward
CNT30648517Vigna angularisRosa chinensis16.0742.3581.94216forward
CNT30355748Vigna angularisLactuca sativa14.2939.0281.77192forward
CNT3038822Vigna angularisCucumis melo15.145.6281.77203forward
CNT30335392Vigna angularisCynara cardunculus14.5824.0581.63196forward
CNT30725197Vigna angularisLupinus angustifolius13.3225.3580.45179forward

Expression of CNT30176139

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MAKLLLLLAIYNSVICSVLIQWFQMEGICS*

>peptide 2 (35 aa)
MPAPARLTVVTAGEEIIDEAISFTFLLLNHLQFCC*

>peptide 3 (71 aa)
MHCTLPPLFATEVMSLFVFLVGNPPKDFSPVNGATMPAPARLTVVTAGEEIIDEAISFTFLLLNHLQTSAQ*

Sequence

>CNT30176139
AGGAAATGCATGTTTAATGGGTTCTTGAATTATTTAAGACAAAGCAACAGAACTGCAGCAACTTTTCATTAATTCTCATCCATTCATTTCTGAAATCAGA
AGTCAAAAATATAGGATGATGAATCTCAAAAAGCAATATAACAATTGAGAATTGGTTCGATCACCAGGCTAGTTTGTATGAAGAGCATCCGTTAGGAGAT
GTCAATTCATTAAATATATCAAATATATCTCCATACATCAAGGGATTAAGCTCTAGCTTTCCACAGAAGATACTCCGGACAACAAAAAGAGAAAAGGAAA
TGGGAATTTGGTTTAAGTACAAAGCAACAAAGTGGGGTGGTTACAAATTATGGAAACTTAGTAGCCTGGTGGCTTGTAGGCAATGAAACTGATGCACTGG
ACTTGACGAACGTTGTCAAAACCAATGATACGGACGAAGCCGTCGGGGTGGGCAGTGCTGGCCTCTTGAACCTCCTTCAAAACCTGAGAAGAATCAGTGC
ACCCATACATAGGCAGCTTCCACATGGTCCAGTACCTTCCATCATAGTATCCAGGTGACCTGTTGTTCGCACGATGTGGGAAAGCGTCCTATAAACAAAC
ACATCATTACCATCAAAACTCAAAACTAAAATTCAACCAAAGGGCTTCCAAGAAATTTACCGTTGCATTTAACTCGAATTCCAAGCAAGGGACCCATCCG
CTCCTAAGAAGGTAGTCTACTTCCTTAGCAAGCTGTTCCTGAGTCAGGTCTGGCAGGTAAGACAGAGTCTCGAACTTCTTCTTCCCAACTGTCGGCCACA
CCTACCCATTTCCATCATGATTTCAGTAACCTTTTCTATACCCTAAACATCCATCTAACATATAATTCCAATCGATTTCTTACCTGCATGCATTGCACTC
TTCCACCGTTGTTTGCAACCGAAGTAATGTCATTGTTTGTCTTCCTGGTTGGGAACCCACCCAAGGACTTCAGCCCAGTGAACGGAGCCACCATGCCGGC
ACCGGCACGGTTAACGGTGGTAACAGCCGGAGAGGAGATCATTGATGAAGCCATTTCCTTCACCTTCTTACTTCTGAATCACTTGCAGACTTCAGCCCAG
TGAACGGAGCCACCATGCCGGCACCGGCACGGTTAACGGTGGTAACAGCCGGAGAGGAGATCATTGATGAAGCCATTTCCTTCACCTTCTTACTTCTGAA
TCACTTGCAGTTCTGCTGCTAGATGGCCAAGCTTCTTCTCCTTCTTGCTATATATAATAGTGTGATCTGTTCAGTATTAATCCAATGGTTTCAAATGGAA
GGGATCTGTTCCTGACATGTTACAACCGTTGGATTCTATAAGTG