Detailed information on CNT30710265


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FNB0|CHLH_ARATH, E-value = 9e-75

BLAST vs NONCODE:
NONPOPT001712, E-value = 6e-55

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676694Glycine maxSetaria viridis37.524.1582.46171forward
CNT30524187Glycine maxSetaria italica71.0549.6281.79324forward
CNT30641519Glycine maxNymphaea colorata53.0727.3184.3242forward
CNT30513968Glycine maxJuglans regia61.6268.8788.26281forward
CNT30524804Glycine maxPhaseolus vulgaris39.4723.5392.22180forward
CNT3084561Glycine maxVigna radiata51.3239.5391.45234forward
CNT30659481Glycine maxTriticum dicoccoides25.4427.4281.9116forward
CNT30133288Glycine maxLolium perenne62.9440.5479.79287forward
CNT3017824Glycine maxZea mays48.4650.2379.64221forward
CNT30347532Glycine maxEragrostis tef51.7545.2179.24236forward
CNT30426485Glycine maxPapaver somniferum69.0819.0381.27315forward
CNT30575700Glycine maxOryza barthii39.9121.7781.32182forward
CNT30585285Glycine maxEchinochloa crusgalli69.5242.8480.76317forward
CNT30603839Glycine maxOryza punctata70.8319.7981.42323forward

Expression of CNT30710265

Peptides detected in this lncRNA

>peptide 1 (96 aa)
SIDGREEIPSSGRSSAAMFTSVATASKAEGGSPMTWSPQGSSSTSLSRLHCLAVLIIELTICGPRPVSLRDWYEEMSSLNCLRPLYSPAFSAGGVR*

>peptide 2 (34 aa)
LVLMGERKYHLRDDQVQLCSLVLQLLPRLRVAHQ*

Sequence

>CNT30710265
CTAGTATTGATGGGAGAGAGGAAATACCATCTTCGGGACGATCAAGTGCAGCTATGTTCACTAGTGTTGCAACTGCTTCCAAGGCTGAGGGTGGCTCACC
AATGACATGGAGCCCACAAGGAAGCAGTTCCACATCCTTGTCAAGATTACATTGTCTAGCTGTGCTGATAATTGAGCTCACAATTTGTGGCCCGCGGCCA
GTGTCCTTGAGGGACTGGTATGAGGAGATGAGCTCACTTAACTGCTTAAGACCTTTGTACAGTCCTGCATTTTCTGCTGGAGGAGTCAGATAGCTGATGG
TATTCGCATAGCTCCTTCGTTTGGCGATGGTAGCCTCAGAAGGGTTGTTTGCAGCATAGTAATAGATATTAGGAATGTTCCCAATCAGACTGTCTGGATA
ACATACATCACTCATCCCCACCTGCTTTCCAGGCATGAATTCAAGGGAACCATGTG