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Detailed information on CNT30641519


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676056Nymphaea colorataSetaria viridis37.2528.0481.52330forward
CNT30524187Nymphaea colorataSetaria italica42.4457.5881.38376forward
CNT30513968Nymphaea colorataJuglans regia31.0467.485.09275forward
CNT30710265Nymphaea colorataGlycine max27.3153.0784.3242forward
CNT3084561Nymphaea colorataVigna radiata15.4623.1484.67137forward
CNT30659481Nymphaea colorataTriticum dicoccoides27.5457.6882.38244forward
CNT30133288Nymphaea colorataLolium perenne33.1841.5382.99294forward
CNT3017824Nymphaea colorataZea mays18.437.0581.6163forward
CNT30347532Nymphaea colorataEragrostis tef15.5826.4481.88138forward
CNT30426485Nymphaea colorataPapaver somniferum41.5322.2483.7368forward
CNT30585285Nymphaea colorataEchinochloa crusgalli19.9823.9283.62177forward
CNT30603839Nymphaea colorataOryza punctata42.4423.0482.45376forward

Expression of CNT30641519

Peptides detected in this lncRNA

>peptide 1 (41 aa)
KFRRFQTNNHQFLPSVFLKSEHSLETPTKTGKSNTTNTFLK*

>peptide 2 (33 aa)
MNNRQQIHDVGLLILKREGAWGHLRSQKWVGHQ*

>peptide 3 (32 aa)
MDCLQHNSICLGCYQSDCQGSRHHSSPLAFQA*

>peptide 4 (46 aa)
MLKTESRCQFNLGNSIKQARLDKSQKLRSLKFTFVRQALVRGDKFT*

>peptide 5 (46 aa)
MFLVESIDYFFLFSLQGYKYNQIQINMLLDVLHVKKFCENMLFLAC*

Sequence

>CNT30641519
GAAGTTTCGTAGATTTCAAACTAACAATCACCAATTCTTGCCGTCTGTGTTCTTAAAAAGTGAACACAGCTTAGAGACTCCAACAAAAACAGGGAAATCG
AATACAACCAATACTTTCCTGAAGTAGAGCAACATCAGTAACTTTAGAATTTCATTAACTTGCAACATGTATTTCAAAATGATGTATCATGACAAAATCG
ATAGATTCAAGTCCTTTTACATTCCATACTGCTAGATGTTTCTCGTTGAGTCTATAGACTATTTTTTTCTTTTTTCACTGCAGGGCTATAAATATAACCA
AATCCAAATTAATATGTTACTTGACGTCCTACATGTGAAGAAATTCTGCGAAAACATGTTATTTCTAGCATGTTAAAAACTGAGAGCAGATGTCAATTCA
ACTTGGGAAACAGCATTAAGCAAGCAAGGTTGGATAAATCTCAAAAATTAAGATCACTAAAGTTTACCTTCGTCAGGCAGGCTCTGGTACGAGGAGATAA
GTTCACTTAACTGCTTCAGACCCTTGTACAGCCCAGCATTTTCTGCTGGTGGGGTGAGGTAACTAATGGTGTTGGCATAGCTACGTCTCTTGGCAATGGT
GGCTTCAGATGGATTGTTTGCAGCATAATAGTATATGTTTGGGATGTTACCAATCAGACTGTCAGGGTAGCAGACATCACTCATCCCCACTTGCTTTCCA
GGCATAAATTCAAGTGAACCATGTGTTCCAAAGTGCAGAACTGCATCAGCCTTGAAAATCTTTTCGACAAATGAATAATAGGCAGCAAATCCATGATGTG
GGCTTGCTGATTTTGAAAAGAGAAGGCGCATGGGGTCACCTTCGTAGCCAAAAGTGGGTTGGACACCAATAAACACATTGCCATAC