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Detailed information on CNT30676694


BLAST search results

BLAST vs Swiss-Prot:
sp|B8ANF1|CHLH_ORYSI, E-value = 2e-87

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30318337Setaria viridisCorylus avellana21.3349.5182.78151forward
CNT30513968Setaria viridisJuglans regia27.6848.0484.69196forward
CNT30710265Setaria viridisGlycine max24.1537.582.46171forward
CNT30179310Setaria viridisSecale cereale23.3151.0886.67165forward
CNT30585285Setaria viridisEchinochloa crusgalli23.0222.0396.93163forward

Expression of CNT30676694

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MWHLQLPEQAQMPCASPSCLPLERHCRMQRTCGSGS*

Sequence

>CNT30676694
ATCTTGTCTTCAACCTCTGAGTAGAGCTCCCTGAGCTTTTCCAAATTCTCCTCTGACGTCTCCCAATAGCCTCTGCCGCTGGCTTCTAGGAAGGTCTGGA
CCAGCTTCCTGAATGAGTTGGGGTTGGTCTCCATGAGCCTCTTCCTCATCGCCTCATCTTCAATGAATGTGGAATTTGCCTCCTCATAAACCCAGTTGTC
AACTTGTCCGGATGTTGCACTCCACCCAACAGTGTTTGTGAGCCGCTTCTCGATCTCTCTAACTCCCTCATAGCCGCTCTTCATCATCCCCTCATACCAC
TTTGGGTTCAGTAGCTTTGTCCTTGCATCAAGACGCACCATCTCCGACGAGTCGAGGTTCTGGAATGTGGCATCTGCAGTTGCCAGAGCAAGCTCAAATG
CCTTGCGCTTCTCCTTCATGCCTGCCCCTGGAGCGTCACTGTCGAATGCAAAGGACTTGCGGCTCAGGTAGCTGATGGTGTTTGCATAGCTCCGGCGCTT
GGCGACGGTTGCCTCTGATGGGTTGTTTGCTGCATAGTAGTAGATGTTGGGGATGTTGCCAATGAGACTGTCAGGGTAGCAGGTATCACTCATCCCAACC
TGTTTGCCCGGCATGAACTCGAGGGATCCATGTGTGCCGAAGTGGAGAACAGCATCAGCCTGGAAGATCTTCTCAACAAAGGTGTAGTATGCTGCAAAGC
CATGGTGA