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Detailed information on CNT30659481


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676056Triticum dicoccoidesSetaria viridis71.6325.7491.42303forward
CNT30524187Triticum dicoccoidesSetaria italica71.8746.5591.45304forward
CNT30641519Triticum dicoccoidesNymphaea colorata57.6827.5482.38244forward
CNT30513968Triticum dicoccoidesJuglans regia47.9949.7580.3203forward
CNT30710265Triticum dicoccoidesGlycine max27.4225.4481.9116forward
CNT30133288Triticum dicoccoidesLolium perenne59.135.3193.6250forward
CNT3017824Triticum dicoccoidesZea mays28.1327.0588.24119forward
CNT30347532Triticum dicoccoidesEragrostis tef22.4618.292.6395forward
CNT30426485Triticum dicoccoidesPapaver somniferum65.7216.883.09278forward
CNT30585285Triticum dicoccoidesEchinochloa crusgalli39.7222.788.1168forward
CNT30603839Triticum dicoccoidesOryza punctata71.8718.6389.14304forward

Expression of CNT30659481

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MLGMLPIRLSGKHASLIPTCFPGMNSRDPCVPKCRTASALKIFSTKV*

>peptide 2 (64 aa)
MLQTHGEGWQTLRTEAALGHLHSQKWLAPVLLQHVSVGGECLVLPHIHAVNNIEVGAVELGLLIM

Sequence

>CNT30659481
GTCAGGTAGCTTATAGTGTTTGCATAGCTTCGACGCTTGGCCACTGTTGCCTCTGAAGGGTTGTTTGCTGCATAGTAGTAGATGTTGGGGATGTTACCAA
TCAGACTATCAGGGAAGCATGCATCACTCATTCCAACTTGTTTCCCGGGCATGAACTCGAGGGACCCGTGTGTGCCGAAGTGCAGAACAGCATCTGCCTT
GAAGATCTTCTCAACAAAAGTGTAGTATGCTGCAAACCCATGGTGAGGGCTGGCAGACTTTGAGAACAGAAGCCGCATTGGGTCACCTTCATAGCCAAAA
GTGGCTTGCCCCAGTTCTCCTCCAGCATGTTAGCGTAGGGGGTGAGTGCTTGGTACTCCCGCACATTCATGCGGTAAACAACATTGAGGTTGGGGCTGTT
GAACTGGGCCTCCTTATCATGAA