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Detailed information on CNT30524804


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FNB0|CHLH_ARATH, E-value = 1e-78

BLAST vs NONCODE:
NONPOPT001712, E-value = 2e-62

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524187Phaseolus vulgarisSetaria italica25.2329.5680.31193forward
CNT30513968Phaseolus vulgarisJuglans regia19.2236.0389.12147forward
CNT30710265Phaseolus vulgarisGlycine max23.5339.4792.22180forward
CNT3093143Phaseolus vulgarisSolanum tuberosum24.4425.3483.96187forward
CNT3084561Phaseolus vulgarisVigna radiata49.864.3695.8381forward
CNT30360704Phaseolus vulgarisLactuca sativa15.1624.9584.48116forward
CNT30426485Phaseolus vulgarisPapaver somniferum24.0511.1279.35184forward
CNT30575700Phaseolus vulgarisOryza barthii35.9532.8980.73275forward
CNT30585285Phaseolus vulgarisEchinochloa crusgalli26.5427.4378.82203forward
CNT30603839Phaseolus vulgarisOryza punctata25.3611.8981.44194forward

Expression of CNT30524804

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MILEYTFPTTRSRSLGEISTPSSGNVTSLSRLHCLAVLIIELTICAPRPVSLRD*

>peptide 2 (34 aa)
MKILPYCFPYTNRFSPSAFKLPGGFPQFSSSAVE*

>peptide 3 (41 aa)
LPTVSANIPGREEIPSSGRSSAAMFTSVATASKAEGGSPMI*

Sequence

>CNT30524804
CTCTTCCTACAGTGTCAGCTAATATTCCTGGAAGAGAAGAAATACCATCTTCAGGACGATCAAGTGCAGCAATGTTCACCAGTGTAGCGACTGCTTCCAA
AGCTGAGGGAGGCTCACCAATGATATGAAGCCCACAAGGTAACAGACGAGACTCAATCTCCATGATCTTGGAATACACCTTTCCAACCACCAGATCGCGC
TCTTTAGGTGAGATCTCCACACCCTCATCTGGCAATGTCACATCTTTGTCAAGATTACACTGTCTAGCTGTGCTGATAATTGAACTCACAATTTGTGCCC
CACGACCAGTGTCTTTGAGGGACTGATATGAGGAGATGAGCTCACTTAACTGCTTAAGACCTTTGTATAGTCCAGCATTTTCTGCAGGAGGAGTCAGATA
GCTAATGGTGTTTGCATAACTTCTGCGCTTGGCTGAACACCTATGAAGATATTACCATATTGTTTCCCATATACCAACAGATTTTCTCCATCTGCATTCA
AATTGCCAGGGGGTTTTCCCCAATTCTCTTCCAGTGCCGTGGAATAGGGAGTCAAATTTTGGTACTCTCGGACGTTCATTTTGTAAGCAATGTTCAAATT
TGGACTACTGAATTGAGCTTCTTTGTCATGAATTACTTCTTCAATCAAAGCTTCTGGAGTCTCTGGAAGGCCTTCAACGTTATAACCATCTCTTTTTAGT
TCTTTCATAACTGAGTATATAGAGGCAAAGACATTGAGATAGGCAGCAGTTCCCACATTTCCTTT