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Detailed information on CNT30359512


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3085829Lactuca sativaVigna radiata24.2626.2783.6798forward
CNT30650515Lactuca sativaRosa chinensis25.7413.2385.58104forward
CNT3026858Lactuca sativaPopulus trichocarpa27.9717.4981.42113forward

Expression of CNT30359512

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLDRRFPMVPVLSSAANIPFPGVAMYLAFLINS

>peptide 2 (30 aa)
FSRSNLKHCTPFRKPGTSFVVLGTTSTKPI*

Sequence

>CNT30359512
TTCAGTCGCTCCAATCTTAAGCACTGCACGCCATTTCGCAAACCGGGCACCAGCTTCGTAGTACTTGGCACAACGAGCACCAAGCCCATCTAACCCTTGA
GTGGTGGTCTCACCATTTGTGCCGGAGAGGTCAACCACACCCTTATCGACTTTAATCCCCGGAAGGACATTGGCCTCAAGGAGAACGTCAACAAAAGGGT
TTCCTCGAAGAGAATGACACCGGAGAGGTAAGTCACTGCGTTTGGAGCAGTGAAGAGAAGTTCACGGAGGGCTTGACGGTTTGACTCGACATTCTCAACG
TTGATGCTCGACAGACGTTTCCCGATGGTTCCGGTGCTCTCATCTGCAGCCAATATACCCTTCCCCGGTGTGGCGATGTACTTGGCATTCTTGATCAACT
CATC