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Detailed information on CNT30641762


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6EW14|RK16_NYMAL, E-value = 2e-75

BLAST vs NONCODE:
NONCSAT000320, E-value = 2e-50

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692068Nymphaea colorataOryza sativa12.3321.5686.21428forward
CNT30405603Nymphaea colorataBeta vulgaris9.3142.2890.4323forward
CNT30196572Nymphaea colorataPisum sativum9.1331.5782.97317forward
CNT30503443Nymphaea colorataNicotiana attenuata9.1393.7984.54317forward
CNT3048584Nymphaea colorataPrunus dulcis6.1966.7790.7215forward
CNT30637715Nymphaea colorataCapsicum annuum3.4637.9793.33120reverse complement
CNT30294297Nymphaea colorataTriticum aestivum10.0869.0388.57350forward
CNT30585847Nymphaea colorataMusa acuminata3.8920.6785.93135forward
CNT3086712Nymphaea colorataVigna radiata6.0870.8185.78211forward
CNT30540371Nymphaea colorataBrassica napus9.5454.884.89331forward
CNT30508578Nymphaea colorataSolanum lycopersicum2.3330.2290.1281reverse complement
CNT30555950Nymphaea colorataOryza glaberrima10.0823.187.71350forward
CNT30147499Nymphaea colorataMedicago truncatula10.6323.4183.2369forward
CNT30442098Nymphaea colorataAegilops tauschii9.9151.9688.66344forward
CNT30243771Nymphaea colorataAvena sativa10.0830.3687.14350forward
CNT30656274Nymphaea colorataTriticum dicoccoides6.6646.3988.74231forward
CNT30310337Nymphaea colorataCamelina sativa9.6820.1188.39336forward
CNT3060130Nymphaea colorataArabidopsis lyrata8.0430.4387.46279forward
CNT30598237Nymphaea colorataFraxinus excelsior6.4236.2682.06223forward
CNT30447455Nymphaea colorataSaccharum spontaneum10.0848.7586.57350forward
CNT30229832Nymphaea colorataAnanas comosus18.2453.8384.68633forward
CNT30655378Nymphaea colorataRosa chinensis17.9842.0283.17624forward
CNT30202977Nymphaea colorataHelianthus annuus3.8325.1990.23133forward
CNT30714122Nymphaea colorataMalus domestica golden3.5129.5490.16122forward
CNT30679333Nymphaea colorataTriticum urartu10.0835.988.57350forward
CNT30620547Nymphaea colorataCajanus cajan6.4571.3489.29224forward
CNT30357951Nymphaea colorataLactuca sativa9.5435.1888.52331forward
CNT30371107Nymphaea colorataOryza glumipatula7.4361.1481.01258forward
CNT30434619Nymphaea colorataPapaver somniferum18.2494.4886.1633forward
CNT30574575Nymphaea colorataVitis vinifera10.6324.1888.62369forward
CNT3059026Nymphaea colorataAmborella trichopoda22.2453.886.27772forward
CNT3025585Nymphaea colorataPopulus trichocarpa7.6362.9581.13265forward
CNT30576477Nymphaea colorataOryza barthii4.9337.2583.63171forward
CNT30116873Nymphaea colorataOryza nivara5.6828.2686.29197forward
CNT30604560Nymphaea colorataOryza punctata7.9227.3182.55275forward
CNT30336889Nymphaea colorataCynara cardunculus9.3337.8187.04324forward
CNT30724130Nymphaea colorataLupinus angustifolius4.7549.486.67165forward

Expression of CNT30641762

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MTTAALSSYRIIIPLSRLSSLHVRTITALITSDLSRGIFGTASLITATITSPI*

>peptide 2 (35 aa)
MPLGSDSVIKPSWINFCSFIPGNLLEVLTNVGGVT*

>peptide 3 (38 aa)
MSISVITSSYDSNTHQFSSSAVVRYIQKGLRLNHLSFI*

>peptide 4 (37 aa)
MVFELFLFIHVSISYISYYIGNSVSTHDELSFFFALI*

>peptide 5 (71 aa)
MFLFLFFIKGICLRHNLLIYPFQRPYYPLSRLLAFIIYNTSGANETILVKFNCLNSRAIEPKTRVPFGFPS*

>peptide 6 (70 aa)
MDEISRANIYSLYLSALFVGSLHNLFEEISSFPARSAIPSSESLGFVFNRILRSHRFRRSHSFSSINVEV*

>peptide 7 (29 aa)
MTWIKSILFLISIRAIPSKPEDILICFCT*

>peptide 8 (29 aa)
MFSVILVDGIRTVPFYPCQHFLYKLLYRQ*

>peptide 9 (32 aa)
MFLYIILDTIPYFFIFLETFGIIFGCANQKER*

Sequence

>CNT30641762
CTCTTTGAAAGAAAATAAGTCTCTTTTCTTAATTCACCTTAAGTTAGTGTTTGAGCCTTAAAATTTATCCCCATGAAAATTTAAATACCTAATCGTTTGA
ATCTTTATTGCGAAGTCTATAAATTATACGTCCCCTTGTTGAATCATAACGGCTGACTTCTATTTTTACTCTATCTCCTGGTAGTATTCGTATAAAACTA
CGTCGTATCCGCCCTGAAACATAACCTAGAACCAGGTCTTCGTTATCTAAGCGAACCCAGAACATGCCATTGGGAAGTGATTCAGTAATTAAACCTTCAT
GGATCAATTTTTGTTCTTTCATTCCAGGTAACCTCCTTGAAGTATTAACTAATGTAGGAGGAGTGACATAGACAACCCACCTCTACTCTCTTTTTCATAA
ATAGGAAGTTACGTATCAAATTCGTATACCAGATGATCACCTCACCATATATAAAACAAAATTTCTCCTCCAATTCTTTCTAGTCGAGCTTCTCGATCTG
TCATTATACCCCTAGAAGTAGAAAGAATTACAACCCCTATCCCGCCTGAAATCCTAGGAATTCGTTGAGAGTTGGAATAGATTCGCAGACCTGGTCTGCT
GATACGCTTTAAAATATTTCTATGTGCTCTTTTCCTATTTCTTCTATGTCGTAGGGTTAAAACCAAGAAATCCTTGTTGTTTTCCCGGTGCTTCCTAACA
TTTTCGATAAAACCCTCTCGTAGAAGTATTTTCACAATGTTTTCGGTAATATTAGTGGATGGTATTCGAACTGTTCCTTTTTATCCATGTCAGCATTTCT
TATATAAGTTATTATATCGGCAATAGTGTCTCTACCCATGACGAACTATCATTTTTTTTTGCTTTGATATAATCAACATGTTTCTTTTTTTATTTTTCAT
TAAAGGTATATGCCTGAGACATAATCTACTAATTTATCCATTTCAAAGACCCTACTACCCATTGTCTCGTCTACTAGCGTTCATTATTTATAATACTTCG
GGAGCTAATGAGACTATCTTAGTGAAATTTAACTGTCTCAATTCACGAGCAATCGAACCAAAAACTCGGGTGCCTTTTGGATTTCCTTCTTGATCAATGA
CAACTGCTGCATTGTCATCATACCGGATTATCATACCGTTGTCGCGCTTGAGTTCTTTACATGTACGTACAATTACAGCTCTGATTACTTCTGATCTTTC
CAGGGGCATATTTGGCACTGCTTCTTTGATTACAGCAACAATAACGTCACCGATATGAGCATATCGGTAATTACTAGCTCCTATGATTCGAATACACATC
AATTTTCGAGCTCCGCTGTTGTCCGCTACATTCAAAAAGGTCTGAGGTTGAATCATCTTTCTTTTATTTGAGTTCTTTCAATGCAAGAGGCGAGGGGGAA
AAGAAAATTTTCTGTCCAGAAATAAGTAAACCAGCGATTATAGATTATATTTTTCATCATTCATAAATATCCCTTTGGTCCGATATCCCTATTCCGCAAT
AACGAATTTTGTTCGTATAGGCATTTGCGCGCCGCTATTTCCATAGCGGCTCTGGCTACGGTTTCTGATACTCCGCCCATTTCATAAAGTATTCGATCCG
GTTTAACGACGGATACCCAATATTCAGGAGATCCCTTCCCCGAACCCATACGTGTTTCCGCGGGTCTTAGTGTAACGGGTTTGTCGGGGAATATACGTAC
CCATATTTTTCCGCCACGACGGGCATATCGTGTCATTGCGCGGCGCCCTGCTTCTATTTGTCTAGATGTGATCCAAGCGGGTTCAAGTGCCTGAAGCGCA
TATTTACCGAAACAAATACGATTGCCCCGATAAGATACTCCTTTCATTCTTCCTCTATGTTGTTTACGAAACCTGGTTCTTTTGGGGTTATAGTTGATGG
TAGTGTCTCAATTCCATCTCTACTACAGAACCGGACATGAGAGTTTCTTCTCATCCAGCTCCTCGCGAATGAAACGATAAATAAACAATAAATAATATTA
GGATTATTTAATGGATGAAATTTCGCGGGCGAATATTTACTCTTTATATTTATCTGCTTTATTCGTAGGGTCGCTCCATAACCTCTTCGAAGAAATCAGT
TCGTTCCCGGCGCGTTCCGCCATCCCGTCCAGTGAATCATTAGGATTCGTTTTCAATCGAATCCTCCGCAGTCACAGGTTCCGTCGTTCCCATAGCTTCT
CCTCCATTAATGTCGAGGTCTGAATTCTGCAATGGAGCTTCTAATTTAATCTGTCCCTGAGTCAATCTCCTCAGTCTCTATCGACTCAATGCTCTTTATT
TTTTGAAATCTATCTCAATTATAGATGAATTGAATTATATTATAGTATATGATGCCTTATCACATTGCCCTTTCTAAGATGATTCATAGACCATACATAT
TGGAATAATATATCATTCTTTTCCCCTTCTCTCTTTCTCTCATCCTTCCATTCATCCGCATCCCTCTATTTTGGTTTCACAACTTACACAATCAATCAAG
ATTCATTTTTACTTTATTGAAAAAGGATTTCAGTTGCTACAAATATATGATTATTATCTCATATAATGACCGATTCCTTGGATCTGAGAATACGAAGCAA
TGAGCTGGTTATTAATTTATATTTATATTAGGTAGGGTCCAATTCTTTCTTTAGTCCCAACGAGTCACACACTAAGCATAGCAATTCTATCATATCAAAG
TGGTAAATCGAATTGTTATTCAAACATATATAATTGATCCGTTTTGACTAAACGGAAAAGACCTAAACTAAATTGAGTTTTTTGCCCTGTCCATGGATAA
GTATCCATGAATAGAATCGCAAGAAAAGGAGCCATTACTCTTCATCCAAAAATATCCAAATTTTTATCCCTAATACTCCATAGATAGTTCGAACTGGATA
GGAACAATAATCAATTTTCACTCGAATGGTCTGTAGGGGAACCCTACCTTCTCTAATCCATTCAACGCGGGCAATTTCGTTTCCATTGAGACGTCCTGCA
ATTTGTACCTGAATTCCCTTTGCATCCGCTTGTTCAGCTAATTCAATAGCTTTTTCATTGCCTTTCTAAAGGAAACTCTATTCTTTAATTGCAGAGCGAT
ATATTCTGCAAGAATATTAGGTTGCCCGTAAGGTCTTGCAACTCTTGCGATAGCAATGTTGAGTCTTCGGTTCACAGAATGAAAGCTTTTTTGTACATTA
GTCTGTAATTCTTCGATTCCTCGGGCTCGACCCTCTATTAACATATTGGCGAATCCAATATGAATTATGACTTGGATCAAATCGATTCTTTTTTTAATAT
CTATACGTGCAATTCCTTCAAAACCTGAGGATATTCTCATATGTTTTTGTACATAATTCTTGATACAATCCCGTATTTTTTCATCTTCCTGGAGACCTTT
GGAATAATTTTTGGTTGTGCGAACCAAAAGGAACGATGACTTTGGGTTGTACCAAGTCTGAAACCAAGTGG