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Detailed information on CNT30585636


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6L3G0|RR3_SACHY, E-value = 3e-144

BLAST vs NONCODE:
NONOSAT001021, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693436Echinochloa crusgalliOryza sativa19.221.0594.741102forward
CNT30405603Echinochloa crusgalliBeta vulgaris5.6342.2889.47323forward
CNT30198977Echinochloa crusgalliPisum sativum6.5720.2682.23377forward
CNT3048584Echinochloa crusgalliPrunus dulcis5.5699.0784.95319forward
CNT30637715Echinochloa crusgalliCapsicum annuum1.9234.8190.91110reverse complement
CNT30185636Echinochloa crusgalliSecale cereale6.1122.6588.32351forward
CNT30293259Echinochloa crusgalliTriticum aestivum9.0436.8993.83519forward
CNT30220592Echinochloa crusgalliHordeum vulgare3.8589.8496.83221forward
CNT30396291Echinochloa crusgalliTriticum turgidum4.8171.6987.68276reverse complement
CNT3086712Echinochloa crusgalliVigna radiata1.0820.8187.162forward
CNT30540371Echinochloa crusgalliBrassica napus5.4952.1584.76315forward
CNT30511668Echinochloa crusgalliSolanum lycopersicum1.8334.8884.76105forward
CNT30555950Echinochloa crusgalliOryza glaberrima16.5962.8495.06952forward
CNT30147499Echinochloa crusgalliMedicago truncatula6.6624.2481.41382forward
CNT30442098Echinochloa crusgalliAegilops tauschii6.0352.2795.09346forward
CNT30243771Echinochloa crusgalliAvena sativa13.5567.4893.06778forward
CNT30656274Echinochloa crusgalliTriticum dicoccoides4.0646.7996.14233forward
CNT30310337Echinochloa crusgalliCamelina sativa5.9820.5384.84343forward
CNT3060130Echinochloa crusgalliArabidopsis lyrata4.930.6485.77281forward
CNT30598237Echinochloa crusgalliFraxinus excelsior4.1338.5482.7237forward
CNT30447572Echinochloa crusgalliSaccharum spontaneum13.6845.6194.27785forward
CNT30135270Echinochloa crusgalliLolium perenne17.4229.0992.31000forward
CNT3018340Echinochloa crusgalliZea mays13.7559.2394.93789forward
CNT30228020Echinochloa crusgalliAnanas comosus5.5923.2189.72321forward
CNT3068454Echinochloa crusgalliLeersia perrieri6.5360.9892.53375forward
CNT30655378Echinochloa crusgalliRosa chinensis5.6321.7588.54323forward
CNT30714122Echinochloa crusgalliMalus domestica golden2.1129.386.78121forward
CNT30689030Echinochloa crusgalliTriticum urartu16.621.0594.12953forward
CNT30351320Echinochloa crusgalliEragrostis tef4.27100.4195.92245forward
CNT30364284Echinochloa crusgalliSorghum bicolor1.4533.3395.1883reverse complement
CNT30620547Echinochloa crusgalliCajanus cajan4.1375.4883.97237forward
CNT30357951Echinochloa crusgalliLactuca sativa5.6434.4388.58324forward
CNT30371107Echinochloa crusgalliOryza glumipatula5.2671.5689.07302forward
CNT30411335Echinochloa crusgalliPapaver somniferum6.7845.0888.17389forward
CNT30574575Echinochloa crusgalliVitis vinifera6.7825.4986.89389forward
CNT3059025Echinochloa crusgalliAmborella trichopoda4.3420.6685.54249forward
CNT30576477Echinochloa crusgalliOryza barthii5.4968.6395.87315forward
CNT30116873Echinochloa crusgalliOryza nivara3.4328.2697.97197forward
CNT30604550Echinochloa crusgalliOryza punctata9.2524.2490.4531forward
CNT30557814Echinochloa crusgalliPanicum hallii7.441.197.18425forward
CNT30550799Echinochloa crusgalliOryza brachyantha6.226.4391.01356forward
CNT30336889Echinochloa crusgalliCynara cardunculus5.6437.8186.42324forward
CNT30724130Echinochloa crusgalliLupinus angustifolius2.8749.484.24165forward

Expression of CNT30585636

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MFSFFFSFWILTHIRETQSTNFFFDLYLVY*

>peptide 2 (30 aa)
MQKDERNIVFPERQTWGFLSSILLFGVLYL*

>peptide 3 (73 aa)
MRFCALKTRSNLSRRSVGTFLASFLNPFFFFFILGVYFTNLKLVINKVINCLPLLYLNLLNFVYSESFYSEFS*

>peptide 4 (58 aa)
MHSARAISFPAKRPAILIFTPFMSAFLVNSMAFFIAFRNETLFFNWKAIYSARILGCL*

>peptide 5 (55 aa)
MMVSFSRRTRNIPLGRASVTKPSKVTFASLGFFFSLQFFFSVIFFSPIFRFLFSK*

>peptide 6 (43 aa)
MDSSIPTIVEYSCGTFQNLARVIHVPSISPSKALRKAIPTVSA*

>peptide 7 (42 aa)
MTLIRPRLRISRHFVQILRTEALIFIYRYSFLITMNLFFWKK*

>peptide 8 (56 aa)
MVRFESCNGAFKKVLSESIFSVLLTRAALFYFFKFLFVVSKVTISNSLFFFIILLY*

>peptide 9 (31 aa)
MKEILSFQKDKPGVFYLQYSFLGFYISNRRN*

>peptide 10 (33 aa)
MTHGFFYRITTSSSSRSEFFNNSTPTDFGFSDE*

>peptide 11 (37 aa)
MFSVIFVDTTRTVPFLFMSAFLIEVSKSAIVSLPIRL*

>peptide 12 (38 aa)
MPSRHEFPQFATYHRICYVNRYMFLSIMNRDCMANHCG*

>peptide 13 (36 aa)
MRKRANFSNSIIFWNIMDRYASIYNGKSWFFFTFLK*

>peptide 14 (36 aa)
MGKSINYTPLAGIITTYFNFDPIPHQYSYRARPDLS*

>peptide 15 (33 aa)
MARNAASLPLPAPFTITSARCKPTVRIASTAVL*

>peptide 16 (35 aa)
MVILGCTKSETEWIYFLSHIFLFYFFFLLGIEILD*

>peptide 17 (33 aa)
MIDLLIFYRCIYSHSDCFLVRISTIRSNRLVIS*

>peptide 18 (33 aa)
MFRIGTNDSNSPTPANQSTFCTNFTNGSSYFHI*

Sequence

>CNT30585636
TGATGCGTCTCTAACTCCATAGAGATTACTTCTCAATACAATTTCTTTCAAATTTAGTAAAATTTCTTGTATGGATTCTTCAATACCTACTATTGTAGAA
TATTCGTGTGGGACGTTCCAAAATTTGGCGCGTGTGATACATGTTCCTTCTATTTCTCCAAGTAAAGCTCTTCGCAAGGCAATACCGACAGTGTCTGCTT
GACCTTTTCTAAGCGGGGACAGAATGAAACGACCATAATAAAGACGCTTACTATCTACTCTTGATTCAACACACTTCCACTCTAGTGTTTGGGTGGATCC
TCTTACCTCCTCTCGAACCATAACAGACTAGTATTATTATTTGATCATTGAATCGTTTATTTCTCTTGAAAGCGGTTTCATTTTTTTACAGACGTCTTTT
TTTAGGAGGTCGACATCCATTATGCGGCATAGGTGTTACATCGCGTATACAACTTAACCGTACACCACTTTTAGCAATGGCCCGTAATGCGGCATCTCTT
CCACTACCAGCACCTTTTACCATAACTTCTGCTCGTTGCAAACCCACTGTACGAATTGCATCTACTGCTGTTCTTTGACCAGCATAGGGTGATGCTTTTC
TTGAGCTTTTGAATCCACAAGTACCTGCGGAGGACCAGAAAACCACCCGACCTTGTGGGTCTGTAACGGTTATAATGGTATTGTTGAAACTGGCTTGAAC
ATGAATAACCCCTTCTGTTATTCTACGTGCACTCTTCCGTAAACTAAAACGAGCATTCCTACGCAAACCAATACGCACTTTCTTACGTGAACCTATTTTT
GGTATAGCTTTTGTCATATTTTATTATCTCATAAATATGAGTTAGAAGTAACAAAAAGAAAAAAAGATACAAAGATATCCGTTTCAGGGTAAAATAGATC
CTTTACTCTCATTTTTTTATTTGGAATTTAGACATTTCCGTAGGTACTTTTTTTTACTTTTTAGAAAGAAAAGCTCCTTTTTCGAAAGATTACCCCTGTC
TTTGTTTATGTTTCGGATTGGAACAAATGACTCTAATTCGCCCACGCCTGCGAATCAGTCGACATTTTGTACAAATTTTACGAACGGAAGCTCTTATTTT
CATATATAGGTATTCCTTTCTTATAACTATGAATCTATTCTTTTGGAAAAAATAAGTCTCTTCACTTAAATTTTGAAACTTGGAAGTTATTACCCTAGAA
AAACCTAATCCTTTGAATCTTTGGTATCCTTCAAATCTTCAGTATCCTTCGAGTCTTCGGTATGCTTTGAATCCTTATGGGGAAGTCTATAAATTATACG
CCCCTTGCTGGAATCATAACGACTTACTTCAATTTTGACCCTATCCCCCATCAGTATTCGTATAGAGCTAGACCGGATCTTTCCTGAAATATAGCCCAGG
ATGATGGTGTCATTCTCTAGGCGAACACGGAACATTCCGTTGGGTAGGGCTTCCGTAACTAAACCTTCGAAAGTAACTTTTGCTTCTCTCGGGTTTTTTT
TTTCTCTCCAATTTTTTTTTTCTGTCATATTTTTTTCTCCTATTTTTCGATTTTTATTTTCAAAATAGGAAGTTCGAGATAGAATTCGGGTACTATAGGG
GAGGCCATTACCATATATAACATAAGACTTCTCCCCCAATTCTGTTTAGTCGAGCTTCTCGATCTGTCATTATACCTCGAGAGGTAGAAAGAATAGCAAT
TCCCATTCCGCCCAAAACCTTAGGAATTCCTTGATAGTTGGCATAAATTCGTAAGCCAGGTCGGCTGATACGCTTTAAAAAGGTTCTAGTTCTATATATT
CCCTTTCTAGTCTTTCTCTTTTGATATCGCAAAGTTGAAACCAAGAAATATCTGTTACTTTCCTGATGTTTCCGAACACTTTCAATAAAACCCTCTCGTA
GAAGTATTTTAACAATGTTTTCGGTAATATTTGTGGATACTACTCGAACAGTTCCTTTTTTATTCATGTCTGCGTTTCTTATAGAGGTTAGTAAATCAGC
AATAGTGTCCTTGCCCATAAGACTCTAATTCTAGGTTCCTCCTAATTTTTCTATAATCAACATGTTTTCCTTTTTCTTTTCATTTTGGATTTTAACGCAT
ATACGTGAGACACAATCTACTAATTTTTTCTTTGATCTATATCTCGTCTACTAGTGTTTATAATACTTCAGGGGCTAATGAAACTATTTTAGTAAAATTC
AATTCTCTCAATTCTTCGGCAATCGCGCCAAAAACTCGAGTTCCTTTTGGATTTCCTTTTTGATCAATGATAACTGCTGCATTGTCATCATAGCGTATTA
TTATACCATCTTCGCATTTGAATTCTTTACATGTACGTACAATTACAGCTCGAATTACTTCGGATCTTTCTAGAGGCATTTGGGGCACTGCGTCTTTGAT
TACAGCAACAATAACATCACCAATACGAGCATATCGCTGATTACCAGCGGCTCCTATGACTCGAATACACATCAATTTTCTAGCTCCACTGTTATCTGCT
ACATTTAAAAGGGTCTGAGGTTGAATCATATTATTTTGATTTCAATTTGTTATTTCAATGCAAAAGGATGAAAGAAATATTGTCTTTCCAGAAAGACAAA
CCTGGGGTTTTTTATCTTCAATACTCCTTTTTGGGGTTCTATATCTCTAATCGAAGAAATTGACTTCGTATGGGCATTTTACTGGCAGCTATAGAGATAG
CTGCTCTAGCTACAGTTTCGGATACTCCGCTCATTTCATAAAGTATTCGACCCGGTTTAACAACGGCTACCCAATATTCAGGGGATCCCTTTCCCGAGCC
CATACGTGTTTCTGTGGGTCTTATTGTAACCGGTTTGTCGGGAAATATACGCACCCATATTTTTCCACCACGACGTGCATATCGTGTCATTGCTCTTCGT
CCTGCTTCTATCTGTCTCGCGGTGATCCAAGCGGGTTCAAGTACTTGAAGAGCATATCTACCAAAACAAATACGATTGCCTCGGCAGGATTTTCCCTTCA
TTCTTCCTCTATGTTGTTTACGAAATCTAGTTCTTTTGGGGTTATAGTCGATGGTTCTTTCTTAGTTCCATCTCTACTGCAAAACTGGACATGAGAGTTT
CTTCTCATCCAGCTCCTCGCGAATTAAATGAGAAAGCGTGCGAATTTCTCTAATTCCATAATATTTTGGAATATTATGGATAGATACGCATCAATATATA
ATGGAAAAAGTTGGTTTTTTTTTACTTTCTTAAAATAGAAAAATATATAGTCAAGAAAGAAGATCTAGAATATATTCAAATTCTATATTTATATAAAAAA
AATCTTTCTTTTTTTTTTTGAATCTCCTTATTTTTATTCTTATTGAATCGTGGTAAAGTATTCTAATATTTCGCGGGCGAATATTTACTCTTTCCTGTCT
TATTTGTTAATTTAGAACCTTATCAAATAAAGCCATTTTTTTGGTTTGTTCCGCCATCCCACCCAATGAAGCGTTAGGATTCGTTTCAATAAAATCCGAT
GCCGTCATAGGTTTTGTCGTTCCCACAGCTTCTCCTTTAATGGTTAGGTTTGAATCCTGCAATGGAGCTTTCAAAAAAGTTCTTTCCGAGTCAATTTTCT
CAGTTTTATTAACGCGGGCTGCTCTTTTTTATTTCTTTAAATTTTTATTTGTTGTTTCAAAAGTTACGATTTCGAATTCTCTCTTTTTTTTTATTATTTT
ATTATATTGATGCTTTATCACATTGCTTTTTTTACGATGTAATTCATAGACCATACACATTGGAATCATATATCTTTCTTATTCTTCTTCTTTCTATCTA
TCATCCCTCCTTTTATCCACATCCCTTTAGTTTTGCTTCACAGCCTAGAATCAGGTTTCTTTTGTAGAGAAAAAAATGCAGTTGCTACAACTATATGATA
GATCTACTCATTTTTTATAGATGTATTTATTCACATAGTGACTGTTTCTTAGTTAGGATCTCGACAATACGAAGCAATAGGTTGGTTATTAGTTAATTTT
CTATAATTACTAAGTTTTTTTCTATTTTTAGTAGGGTTCAGCCAATTTTTTTTTTCAATCTCCATTTTTGACCCTAAAGAAAAAACTAACGAGTCACACA
CTAAGCATAGCAATTATATTAAAAGATTTATCAATTTTCATTAAATCTTATAGAAAGAGGTATAATTTCTTCTTTTTTTTTTAGGGATTTTTGGAAAAAT
AAAATAAAGTTCTTGTCTTTTTTATTCTATCACAGGGCAGAATAGGAAGACTGCGTTAGTTATTCTTCTTCTACGAATATCCAAATTTTTACACCTAATA
CTCCATAGATAGTTCGAATTGGATAGCAGCAATAATCAATTTTAGCGCGAATTGTTTGGAGGGGCAGTCTGCCCTTTTTGATGCATTCCGCACGTGCAAT
TTCTTTCCCTGCTAAACGACCCGCTATTTTGATTTTTACTCCCTTTATGTCTGCTTTTTTAGTTAATTCAATGGCTTTTTTCATAGCTTTTCGGAATGAA
ACTCTATTTTTTAATTGGAAAGCTATATATTCCGCAAGAATATTAGGTTGTCTATAGGGTTCTTTAACCTTTTCGATAGCAATATTAAGTCTCTGGTTTA
CAGAATTAACTTCCTTTTGGAGATCTTTCTCTAATTCTTCAATTGCTCCCTTTTTCTTTAATAAATTTGGGAATCCAATATGGATTATGACGTGGATTGT
ATCGATTTCTTTTTGAATTTCTATATGTGTAATTACTTCAGAACTTGAGTCTGATTCTATTTTTCTATTCGAGCCTTTTTTCCTATTCTTTTGTATATAG
TTCTTGATACAATTCCGTATTTTTTTGTCTTCCTGTAGACCTTCAGAATAATTTTTTGGTTGTGCGAACCAAAAGGAATGGTGATTTTGGGTTGTACCAA
GTCTGAAACCGAGTGGATTTATTTTTTGTCCCATATTTTTCTATTCTATTTCTTTTTTTTATTGGGAATCGAAATCTTGGATTGATCTAAAGATTATTTA
GATTTCTTTACTATATTTAGTACAATTGTTATATGACACATGGTTTTTTTTATAGAATAACTACGTCCTCGAGCTCGAGGTCTGAATTTTTTAATAATAG
TACTCCTACTGACTTCGGCTTTAGTGATGAATAAACTCGCTTTGTCGAAATCCCTATAATGAGTAGCATTTGCTGCTGCCGAATAAACCAACTTTAAGAT
GGGATAAGATGCTCGATAAGGCATGAGGTTCAGTATCATAACGGTTTCCTCGTAGTAACGCCAGCGAATCTCATCAAGAACTCTTTGTGCTTTGAAAACA
GACATATGTATGCGTTTTTGTGCTTTGAAAACCCGTTCGAATTTAAGTAGACGATCGGTTGGAACTTTTCTTGCGAGTTTCCTTAACCCGTTCTTTTTCT
TCTTTATCCTAGGGGTATACTTTACCAATTTGAAACTTGTCATAAATAAGGTTATTAACTGCCTACCTTTACTTTATTTGAATCTTTTAAATTTTGTTTA
TTCTGAATCTTTCTATTCTGAATTCAGTTAACGACGGGATTTAGTATCCTTTCTTGCACTTTCATAACTCGTGAAATGCCGAGTAGGCACGAATTCCCCC
AATTTGCGACCTACCATAGGATTTGTTATGTAAATAGGTATATGTTCCTTTCCATTATGAATCGCGATTGTATGGCCAACCATTGCGGGTAGAATGCTAG
ATGCCCGGGACCACGTTACTATTATTTCTTTCTCCTCCTT