Detailed information on CNT30617951


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30272829Sesamum indicumChenopodium quinoa8.1425.0889.6177forward
CNT3070208Sesamum indicumQuercus suber8.9933.3385.8885reverse complement
CNT30379495Sesamum indicumManihot esculenta7.2921.4389.8669forward
CNT30406606Sesamum indicumBeta vulgaris8.1424.9289.6177forward
CNT30505537Sesamum indicumNicotiana attenuata13.1140.5283.87124forward
CNT3044357Sesamum indicumPrunus dulcis14.0643.7587.22133forward
CNT30158859Sesamum indicumPistacia vera7.424.3992.8670reverse complement
CNT3094411Sesamum indicumSolanum tuberosum11.7337.2584.68111reverse complement
CNT30566737Sesamum indicumActinidia chinensis13.7452.2186.15130reverse complement
CNT30509042Sesamum indicumSolanum lycopersicum7.422.8891.4370forward
CNT30172978Sesamum indicumTrifolium pratense7.2922.5589.8669forward
CNT3061108Sesamum indicumArabidopsis lyrata6.9828.8290.9166reverse complement
CNT30597892Sesamum indicumFraxinus excelsior17.1253.1183.95162reverse complement
CNT30215606Sesamum indicumHelianthus annuus17.7655.0883.93168forward
CNT30644781Sesamum indicumCannabis sativa8.8836.0590.4884reverse complement
CNT3026903Sesamum indicumPopulus trichocarpa7.423.0391.4370forward
CNT3050851Sesamum indicumCucumis sativus6.5520.690.3262forward

Expression of CNT30617951

Peptides detected in this lncRNA

>peptide 1 (52 aa)
LRELITQAGISKWLNIELTQLVGPLVARCWHARSKLGVWAMWSRRRYGLRAS*

>peptide 2 (64 aa)
MLACPFQARSLGHVVQAKVWASCLLKWRALRQAGFTEQRKPPALCSGRITCRCSIGSPKLDGWP*

Sequence

>CNT30617951
GTTGCGTGAGCTTATAACCCAAGCGGGGATATCAAAGTGGTTGAACATTGAGCTTACTCAACTAGTTGGGCCACTGGTTGCTAGATGCTGGCATGCCCGT
TCCAAGCTAGGAGTTTGGGCCATGTGGTCCAGGCGAAGGTATGGGCTTCGTGCCTCTTAAAGTGGAGGGCACTGCGTCAGGCTGGCTTCACAGAGCAGCG
AAAACCTCCCGCTCTTTGTAGTGGAAGGATAACGTGTCGGTGCTCCATTGGCTCACCAAAGCTAGATGGCTGGCCCTAACTGAACAATCACTTTTTTTCT
TATTTTTTTTCAAACTAAAAATTAAATGAATGTGGTAATAATGTTTTTTTTAATTTAACCAAACTCACCAAATCGAATTATGAGCTATTCATTACGTAGA
ATACAGTGAGATTAGTCGATCTTTTCTTATTTTCGACATGTATTTGACCATCCTTCAATTTTTTTATGTGCATTTATCTATTTTATTGGTAAAGTAGGTA
TGGTTCTTGAAACTTCTATAATGCACAATTTTTCATATATAATGCAATGTTTTTATTGCAATTAAAAGTATTGACATTGTAATTAGTCTGTGGATCGTAT
ACCCTTGATATTATATATGAAATTGTATGCTACAAAAATATATAATAATGGAGAAGACTGGTAAGTTTACGCTATCACGTGTTTGATCACGATTTCTCCT
AACTAAATATTAAAGCCTAATTACATAATTCTTTTGTTTAACATAATATTAGGTGAAGAAGTCAACTTCAAATTTATATTTTTTTTTTGTTGATCGCTAA
TACTCTTTTGAATAGACAATTAGCATAATTTAATTTTTCTGGACAGTCACATAATTAAGTATCTTTAATAGGTAATGCAGATAATAGAGTTGTAAATTAA
TAATTTTAATTTCCTCTAATATTTTAATTGATTATATTGAAATCCC