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Detailed information on CNT30379495


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617951Manihot esculentaSesamum indicum21.437.2989.8669forward
CNT3084371Manihot esculentaVigna radiata23.2916.458875reverse complement
CNT30718168Manihot esculentaMalus domestica golden23.9125.1690.9177forward
CNT30626615Manihot esculentaDaucus carota18.6320.9188.3360forward
CNT30155059Manihot esculentaPrunus persica24.8426.0693.7580forward

Expression of CNT30379495

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MKLLERRLGGSPSFLEQRVPRKAGFTEQRPPLALGSGRITSCCRTNSHDQRWAA*

Sequence

>CNT30379495
CTCGAGCTCAGTTAGCGTGGGCTTGTCACCCAAGTGGGGGATGATATGAGGTGATGGAACGTTGATCTCCAGCCCAGAAGGTTGGATGGATTCTATCTGG
CTAATTTCTGGCTTGCCCATTCCAAGCTAAGAGTTGAAACATGAAACTTCTCGAACGAAGGCTTGGTGGGTCTCCTAGTTTTCTAGAGCAGAGGGTACCG
CGTAAGGCTGGCTTCACAGAGCAGCGACCACCTCTCGCTCTTGGTAGTGGAAGGATAACAAGCTGTTGTCGCACGAATTCGCATGACCAGAGATGGGCTG
CCTAATTTGGACCATCGCTTTT