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Detailed information on CNT30215606


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30499557Helianthus annuusCoffea canephora31.4831.2784.3896reverse complement
CNT30617951Helianthus annuusSesamum indicum55.0817.7683.93168forward
CNT30563209Helianthus annuusActinidia chinensis52.7947.9281.99161reverse complement
CNT30647270Helianthus annuusRosa chinensis43.6143.3284.96133forward
CNT30354850Helianthus annuusLactuca sativa100.3338.4484.64306forward
CNT30154450Helianthus annuusPrunus persica43.6143.6184.21133forward
CNT30644641Helianthus annuusCannabis sativa46.5638.1785.21142forward
CNT30120686Helianthus annuusCitrus clementina26.8927.2486.5982reverse complement
CNT30174907Helianthus annuusVigna angularis32.1332.1384.6998forward
CNT30334668Helianthus annuusCynara cardunculus98.3650.5184.67300forward

Expression of CNT30215606

Peptides detected in this lncRNA

>peptide 1 (89 aa)
PGLVTRACDSSEGFKAGWTVFEPRLVGSSWCNIWLARSKFGVGPCGLGEGLGYLAPKVEGNALGWFHRAARTSRSRQWKDYMSVHPWLS*

Sequence

>CNT30215606
GCCGGGCTTGGTAACGCGAGCCTGTGACTCAAGTGAGGGCTTTAAAGCGGGATGGACTGTGTTTGAGCCCAGATTGGTTGGGTCAAGTTGGTGCAATATC
TGGCTTGCCCGTTCCAAGTTTGGAGTTGGGCCATGTGGTTTAGGCGAAGGCCTGGGCTACTTGGCTCCTAAAGTTGAGGGCAATGCGTTAGGCTGGTTTC
ACAGAGCTGCGAGAACCTCACGCTCTAGACAGTGGAAGGATTACATGTCGGTGCACCCTTGGCTCAGTTAACCATCTGGGTTCCTTCTAATGAACTCCCA
CTTTT