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Detailed information on CNT30616511

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 5e-38

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30315993	Sesamum indicum	Corylus avellana	65.85	42.87	81.63	430	forward
CNT30500604	Sesamum indicum	Coffea canephora	78.41	83.25	83.98	512	forward
CNT30727661	Sesamum indicum	Corchorus capsularis	65.08	67.89	82.12	425	forward
CNT30710529	Sesamum indicum	Glycine max	37.98	43.97	81.05	248	forward
CNT30256659	Sesamum indicum	Avena sativa	47.47	43.36	79.68	310	forward
CNT30312353	Sesamum indicum	Camelina sativa	61.87	98.54	81.19	404	forward
CNT3079663	Sesamum indicum	Brassica juncea	61.1	75	80.7	399	forward
CNT30205103	Sesamum indicum	Helianthus annuus	40.28	37.15	81.37	263	forward
CNT30625277	Sesamum indicum	Daucus carota	27.57	29.32	83.89	180	forward
CNT30366570	Sesamum indicum	Sorghum bicolor	41.19	43.95	81.04	269	forward
CNT3028162	Sesamum indicum	Theobroma cacao	66.46	77.36	80.41	434	forward
CNT3051546	Sesamum indicum	Amborella trichopoda	43.03	58.3	80.43	281	forward
CNT30176441	Sesamum indicum	Vigna angularis	49.92	53.88	81.9	326	forward
CNT30114394	Sesamum indicum	Ficus carica	29.56	32.44	81.87	193	forward

Expression of CNT30616511

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MTEKLGCMMERWDCKKVRLGCKMERLGCKRVTLGCKRVKWGCKQGMLGCMQGMLGYSSEMSDCNLEM*

>peptide 2 (33 aa)
MQDLLGYIQVNWDYMLGKWGYNQGKTGCNLEMM*

Sequence

>CNT30616511
CTGTAACTTGGAGAGGACGGACTGTAAGGACTAGAAGGTGAGATCTTTGGACTTGTAGGTGAATATGCAAGAGAAGGGCTGTATCTTGCTGAAGGATTGT
AACTTGGAGATGTAGGGCTATAACTTGGTGAGGTAGGACTGTAACTTGGAGAGGTTGGGCTATATGACGGAGAAGTTGGGCTGTATGATGGAGAGGTGGG
ACTGTAAGAAGGTGAGGTTGGGCTGTAAGATGGAGAGGTTGGGCTGTAAGAGGGTGACGTTGGGCTGTAAGAGGGTGAAGTGGGGCTGTAAGCAGGGGAT
GTTGGGCTGTATGCAGGGGATGTTGGGCTATAGCTCGGAGATGTCGGACTGTAACTTGGAGATGTAGGACTATAACTTGGTGAAGTCGGACTATAGCTAG
GAGAAGTTGGGCTGTAGGTTGGAGAAGTAGGTGAGTAGGATGGGCTAGTTGGAGAATATGCAGGACTTGTTGGGCTATATCCAGGTGAACTGGGACTATA
TGTTGGGGAAGTGGGGCTATAACCAGGGGAAGACGGGCTGTAACCTGGAGATGATGTAGGAGAGAAGGCCATTCCACCAACATAAGGAGAAAACTGGGCA
TCTGTAACAGGAGATAACCGCAGATTTGGGCTGAGCAAATAACTTGGTGACAT