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Detailed information on CNT30710529

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 2e-111

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30536042	Glycine max	Eucalyptus grandis	63.12	64.73	79.78	356	forward
CNT30316008	Glycine max	Corylus avellana	77.48	66.82	80.55	437	forward
CNT30700805	Glycine max	Quercus lobata	51.42	95.71	81.38	290	forward
CNT30376889	Glycine max	Arabidopsis thaliana	37.06	59.71	84.21	209	forward
CNT30616511	Glycine max	Sesamum indicum	43.97	37.98	81.05	248	forward
CNT30269270	Glycine max	Chenopodium quinoa	51.95	55.81	83.28	293	forward
CNT30727660	Glycine max	Corchorus capsularis	51.42	53.02	80.34	290	forward
CNT30403782	Glycine max	Beta vulgaris	31.21	42.11	83.52	176	forward
CNT30195835	Glycine max	Pisum sativum	34.4	76.38	90.21	194	forward
CNT30489068	Glycine max	Olea europaea	59.4	67.81	80.6	335	forward
CNT30506120	Glycine max	Nicotiana attenuata	66.31	63.93	82.62	374	forward
CNT30304911	Glycine max	Triticum aestivum	50.35	47.49	80.63	284	forward
CNT30400271	Glycine max	Triticum turgidum	45.04	51.31	80.71	254	forward
CNT30559586	Glycine max	Actinidia chinensis	54.61	38.17	84.42	308	forward
CNT30591824	Glycine max	Musa acuminata	62.06	88.61	80.57	350	forward
CNT30508722	Glycine max	Solanum lycopersicum	50.35	55.36	83.45	284	forward
CNT30554593	Glycine max	Oryza glaberrima	25	44.06	86.52	141	forward
CNT30171519	Glycine max	Trifolium pratense	35.46	58.82	89	200	forward
CNT30256659	Glycine max	Avena sativa	55.32	43.64	82.37	312	forward
CNT30263629	Glycine max	Brassica rapa	74.29	73.12	80.91	419	forward
CNT30468525	Glycine max	Saccharum spontaneum	49.82	33.33	82.92	281	forward
CNT3017147	Glycine max	Zea mays	50.35	39.72	84.51	284	forward
CNT30688581	Glycine max	Triticum urartu	50.35	48.88	80.63	284	forward
CNT30341749	Glycine max	Eragrostis tef	48.23	61.12	82.35	272	forward
CNT30355182	Glycine max	Lactuca sativa	38.12	30.71	81.86	215	forward
CNT3027914	Glycine max	Theobroma cacao	48.23	90.97	81.99	272	forward
CNT3023412	Glycine max	Populus trichocarpa	42.38	42.3	82.85	239	forward
CNT30149986	Glycine max	Brachypodium distachyon	55.67	35.01	80.89	314	forward
CNT30577348	Glycine max	Oryza barthii	25	54.86	86.52	141	forward
CNT30584594	Glycine max	Echinochloa crusgalli	57.98	52.91	82.57	327	forward
CNT30497833	Glycine max	Digitaria exilis	44.5	28.46	82.47	251	forward
CNT30558075	Glycine max	Panicum hallii	57.27	40.94	82.97	323	forward
CNT30551544	Glycine max	Oryza brachyantha	50.89	41.29	81.18	287	forward
CNT30114394	Glycine max	Ficus carica	30.85	29.24	82.76	174	forward

Expression of CNT30710529

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MWGCKLVKWGCKLVKWGCSWERWGCSWVM*

>peptide 2 (29 aa)
VGLYGLDGDNLGLLGEYANEGLYFADCGL*

>peptide 3 (30 aa)
WDYMDLMETISDCLENMLTKDYTLLTVDCN*

Sequence

>CNT30710529
GTGGGACTATATGGACTTGATGGAGACAATCTCGGACTGCTTGGAGAATATGCTAACGAAGGACTATACTTTGCTGACTGTGGATTGTAACTAGGGGAAG
TAGGGCTATACGATGGCGAGGTTGGGCTATATGAGGGTGAGGTTGGGCTGTATCCAGGCGATGTGGGGCTGTAAGCAGGTGATGTAGGACTATATGATGG
AGATGTTGGACTGTAAGAGGGTGATGTAGGGCTGTAGGAAGGAGATGTGGGGCTGTAAGCTGGTGAAGTGGGGCTGTAAGCTGGTGAAGTGGGGCTGTAG
CTGGGAGAGGTGGGGCTGTAGCTGGGTGATGTAGGGCTGTAGCTGGGTGATGTAGGACTGTAGCTGGGTGATGTGGGAGAGTAGGATGGACTGGTAGGCG
AATAAGCTGGACTTGTAGGACTATATCCCGGAGAGCTAGGACTATAAGTCGGAGAGGTGGGACTGTACCCAGGTGACGTGGGACTGTACCCGGGTGACGT
GGGGCTGTATCCGGGTGAAGTGGGACTGTACCCGGGTGATGAGGGACTATAGCCTGGGGATGAT