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Detailed information on CNT30205103


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640872Helianthus annuusNymphaea colorata24.4422.8582.08173forward
CNT30549101Helianthus annuusIpomoea triloba38.4246.181.25272forward
CNT30376379Helianthus annuusArabidopsis thaliana30.5129.0383.33216forward
CNT30616511Helianthus annuusSesamum indicum37.1540.2881.37263forward
CNT3021339Helianthus annuusCitrullus lanatus33.3337.2280.93236forward
CNT30727660Helianthus annuusCorchorus capsularis46.8960.6979.82332forward
CNT30490956Helianthus annuusOlea europaea38.4264.7683.09272forward
CNT30559586Helianthus annuusActinidia chinensis81.6471.6277.85578forward
CNT30554634Helianthus annuusOryza glaberrima33.3328.5480.93236forward
CNT30442780Helianthus annuusAegilops tauschii40.436.0781.12286forward
CNT30312227Helianthus annuusCamelina sativa34.658.0682.04245forward
CNT30468525Helianthus annuusSaccharum spontaneum33.7628.3582.85239forward
CNT30341749Helianthus annuusEragrostis tef38.8461.882.91275forward
CNT30476914Helianthus annuusArabidopsis halleri30.3738.3982.33215forward
CNT30330871Helianthus annuusDioscorea rotundata35.4534.7281.27251forward
CNT30577473Helianthus annuusOryza barthii33.3343.380.93236forward

Expression of CNT30205103

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVKWGCRMGRSGCTLGMSGCMLGMSGCRQET*

Sequence

>CNT30205103
CTGTAGCTAGGTGACGTCGGGCTATATGGACTTGAAGGTGACAGCCTCGGACTGCTAGGGGAATAAGCAAGAGAGGGGCTGTACTTGGCAGATGACGGAT
TGTAACTTGGTGAGGTTGGGCTGTAGCTTGGTGAAGTTGGGCTGTAGCTAGGCGAAGTTGGACTGTAGCCAGGAGAAGTCGGGCTGTAAGCAGGTGAGGT
GGGGCTGTAGGATGGAGAGGTAGGGCTGTAGGATGGTGAAGTGGGGCTGTAGGATGGGGAGGTCGGGCTGTACGCTGGGGATGTCGGGCTGTATGCTGGG
GATGTCGGGCTGTAGGCAGGAGACGTAGGGCTGTAACTAGGTGATGTGGGGCTATAACTAGGTGACGTGGGTGAGTAACTGGGAGATGTGGGGGAGTAGC
TAGGTGAGGTGGGAGAATAGCTGGGAGAAGTCGGGGAGTACGTAGGACTGGTTGGACTATAGCCAGGGGAACTTGGACTATACGTTGGTGAAGTGGGACT
ATAACCAGGTGATGTAGGGCTATAGCCAGGAGACGAAGGGCTGTAACCTGGAGAAGAGGGACTGTATCCAGGTGAAGAAGCCGGAGAAAAGCCCATCCCG
CCAACATAAGGTGAAAACTGTGCATCGTTAAACGGTGACAATCTTAGATTCGGGCTCAGAAGATAATTAGTCGGCGACATCATTCCATCGTGATAAGGAG
TGATTGGG