SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 8440 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3097065 Solanum tuberosum 10:46490636-46491608 (-) coding (0.06)- 67 0.49 3
CNT3097064 Solanum tuberosum 10:47723687-47729961 (-) noncoding (-0.106496)- 70 7.91 5
CNT3097063 Solanum tuberosum 10:11547186-11550101 (-) noncoding (-0.0004096)- 46 23.24 3
CNT3097062 Solanum tuberosum 10:52459136-52462006 (+) noncoding (-0.032768)- 31 14.53 2
CNT3097061 Solanum tuberosum 10:15972634-15989007 (-) noncoding (-0.090112)- 53 27.25 3
CNT3097060 Solanum tuberosum 10:1561926-1567824 (+) noncoding (-0.0004096)7e-62 (sp|Q9LSQ4|GH36_ARATH) 70 11.83 2
CNT3097058 Solanum tuberosum 10:47651961-47657294 (-) noncoding (-0.0004096)- 49 0.73 7
CNT3097057 Solanum tuberosum 10:18312294-18313008 (+) noncoding (-0.0004096)- - 66.22 1
CNT3097056 Solanum tuberosum 10:5902318-5906137 (+) noncoding (-0.0004096)- 40 5.65 4
CNT3097055 Solanum tuberosum 10:47625530-47639225 (+) noncoding (-0.0028672)- 71 36.56 2
CNT3097054 Solanum tuberosum 10:56563275-56564864 (-) noncoding (-0.049152)- 80 38.02 3
CNT3097053 Solanum tuberosum 10:56974465-56975006 (+) noncoding (-0.04096)- 89 3.01 2
CNT3097052 Solanum tuberosum 10:13958764-13962143 (-) noncoding (-0.0155648)- 83 4.44 5
CNT3097051 Solanum tuberosum 10:34669959-34672307 (+) noncoding (-0.0507904)0.0000000000006 (sp|P10978|POLX_TOBAC) 78 5.51 1
CNT3097050 Solanum tuberosum 10:54964519-54966088 (-) noncoding (-0.036864)9e-153 (sp|P0CH33|UBQ11_ARATH) 54 0 3Conserved counterparts:
CNT3097049 Solanum tuberosum 10:55122185-55124195 (-) noncoding (-0.0004096)- 37 4.55 2
CNT3097046 Solanum tuberosum 10:2437388-2448962 (-) noncoding (-0.0004096)- 50 34.27 2
CNT3097045 Solanum tuberosum 10:39482111-39484607 (-) noncoding (-0.0258048)- 60 23.38 1
CNT3097043 Solanum tuberosum 10:57939437-57942349 (+) noncoding (-0.0004096)2e-19 (sp|Q9FYE5|UUAT1_ARATH) 46 6.23 2
CNT3097042 Solanum tuberosum 10:47817844-47824829 (-) noncoding (-0.0004096)- 34 4.66 2
CNT3097041 Solanum tuberosum 10:51326461-51330122 (+) noncoding (-0.032768)- 51 5.07 4
CNT3097040 Solanum tuberosum 10:53037615-53038198 (+) noncoding (-0.012288)- - 8.36 1
CNT3097039 Solanum tuberosum 10:1523254-1526574 (-) noncoding (-0.110592)5e-67 (sp|Q9CAE3|FLD_ARATH) 87 3.64 3
CNT3097038 Solanum tuberosum 10:3415250-3415924 (+) noncoding (-0.0004096)- 46 22.28 1
CNT3097036 Solanum tuberosum 10:47695524-47699231 (+) noncoding (-0.0004096)- 36 23 4
CNT3097035 Solanum tuberosum 10:49779260-49780205 (+) noncoding (-0.0004096)- 69 14.95 2
CNT3097034 Solanum tuberosum 10:57863082-57864346 (-) noncoding (-0.0217088)- 58 3.18 1
CNT3097033 Solanum tuberosum 10:57921962-57931469 (+) noncoding (-0.0393216)- 92 5.81 6
CNT3097032 Solanum tuberosum 10:51873159-51903439 (-) noncoding (-0.0094208)1e-169 (sp|Q9XG54|OPR1_SOLLC) 54 1.54 3
CNT3097031 Solanum tuberosum 10:19898112-19899391 (-) noncoding (-0.004096)- 31 5.31 2
CNT3097029 Solanum tuberosum 10:51790989-51879760 (-) noncoding (-0.126976)5e-48 (sp|Q9XG54|OPR1_SOLLC) 56 0.91 2
CNT3097028 Solanum tuberosum 10:58650209-58650997 (+) coding (0.031)- 76 6.4 2
CNT3097027 Solanum tuberosum 10:59416408-59416708 (-) noncoding (-0.667648)- 37 127.69 1
CNT3097026 Solanum tuberosum 10:54964519-54965805 (-) noncoding (-0.0090112)3e-139 (sp|P0CH33|UBQ11_ARATH) 63 0.3 2Conserved counterparts:
CNT3097024 Solanum tuberosum 10:53055832-53057217 (+) noncoding (-0.0004096)- 48 8.97 3
CNT3097023 Solanum tuberosum 10:43317601-43335023 (-) noncoding (-0.053248)- 79 15.57 2
CNT3097021 Solanum tuberosum 10:47723647-47724567 (-) noncoding (-0.0004096)- 56 15.66 2
CNT3097020 Solanum tuberosum 10:47636499-47639146 (+) noncoding (-0.012288)- 62 0 2
CNT3097019 Solanum tuberosum 10:48565889-48567191 (+) noncoding (-0.110592)- 60 5.16 2
CNT3097018 Solanum tuberosum 10:57855121-57857135 (-) noncoding (-0.008192)- 41 19.29 2
CNT3097017 Solanum tuberosum 10:31430715-31463901 (-) noncoding (-0.0724992)- 83 9.74 2
CNT3097016 Solanum tuberosum 10:57226792-57227051 (-) noncoding (-0.0004096)- 44 11.89 1
CNT3097014 Solanum tuberosum 10:47652108-47658391 (-) noncoding (-0.106496)- 76 0 6
CNT3097013 Solanum tuberosum 10:47286139-47300679 (-) noncoding (-0.110592)4e-24 (sp|Q9FHW7|SKP1B_ARATH) 52 0.49 2
CNT3097012 Solanum tuberosum 10:58437348-58445776 (-) noncoding (-0.028672)3e-85 (sp|Q9ZSK5|ZOG_PHALU) 88 19.53 2
CNT3097011 Solanum tuberosum 10:6901605-6901806 (+) noncoding (-0.0720896)- 60 59.51 1
CNT3097009 Solanum tuberosum 10:47627926-47639262 (-) noncoding (-0.0004096)- - 32.22 2
CNT3097008 Solanum tuberosum 10:56369892-56370155 (-) noncoding (-0.0004096)- 39 4622.87 1
CNT3097007 Solanum tuberosum 10:872819-879871 (-) noncoding (-0.0004096)- 80 31.32 2
CNT3097006 Solanum tuberosum 10:54529374-54539472 (+) noncoding (-0.086016)1e-88 (sp|A6YIH8|C7D55_HYOMU) 65 28.64 2