CANTATAdb - search

Detailed information on CNT3086267

BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONTPRT002153, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30172216	Vigna radiata	Trifolium pratense	48.2	54.17	87.54	923	forward
CNT30147063	Vigna radiata	Medicago truncatula	47.89	83.52	89.2	917	forward
CNT30324534	Vigna radiata	Asparagus officinalis	43.34	64.89	82.89	830	forward
CNT30724005	Vigna radiata	Lupinus angustifolius	47.36	70.26	86.77	907	forward

Expression of CNT3086267

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MKTRDPDNSISIINYRNGRKNTFEQIKITRNFSGLYSTEYLWQI*

>peptide 2 (50 aa)
MPSLSCILALTLSIVSELSTSKVIVFPVRVLTKICIPPRSRKTRWRVDSF*

>peptide 3 (40 aa)
MVSELSTSRVIVFPVNVFTKICIPPRRRSTRWRVDSFWML*

>peptide 4 (48 aa)
MKSGLLLNVVISQSTSILKLLSSKNQPLLVWRNALLVLYLGLDIVNRV*

Sequence

>CNT3086267
TGAAAACCATGATAAACCTCAGATATTATTATTATTAGATTAAAGGATGAATTTATCTAAACATAACTAAAAGTGAATTTTGCTTAGAAAGAAAATAAAA
CATGGATTTTAGTAGCACGGTAATGATAACGTATGCAGAACTAAAACAACCAATTAGAACAAGGTACTGAAAATATAACAGGATAGCAAATTGTACAGAT
TCAAAGGCAGCTATGACCCGAGTCGGCACAATTTCGGATAGTTCAGGAACATAAAAAACCGAAAGAGAAAAAAAAAAAGAGCAGCTACACTTGCACATAA
TTCACCAAATCAACAAGGGACCTTGAGAAGATAATCAGACTTAAAACCCACCACGAAGACGCAATACCAGGTGAAGGGTGGACTCTTTCTGAATGTTGTA
ATCAGCAAGAGTCCTGCCATCCTCCAATTGCTTCCCTGCGAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGGATTTTTGCCTTGACG
TTATCAATTGTATCTGAGCTTTCAACTTCCAAAGTGATAGTCTTCCCTGTTAAAGTTTTCACGAAGATCTGCATGCCTCCCCTCAGACGAAGTACAAGAT
GAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCCAGAGTACGTCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGAGGAATGCC
CTCCTTGTCCTGTATCTTGGCCTTGACATTGTCAATCGTGTCTGAACTCTCCACCTCCAAAGTAATTGTTTTTCCAGTAAGGGTCTTGACGAAAATCTGC
ATACCACCACGGAGTCGCAAGACAAGATGGAGAGTTGACTCTTTCTGAATGTTATAATCTGCCAAGGTTCGGCCGTCTTCAAGTTGCTTTCCAGCAAAGA
TGAGCCTCTGTTGGTCTGGTGGAATACCCTCTTTGTCTTGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCTACCTCAAGGGTGATTGTCTT
TCCCGTCAACGTCTTCACAAAGATTTGCATTCCACCACGGAGACGGAGCACCAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAATCAGCAAGGGTACGA
CCATCCTCAAGCTGTTTGCCAGCAAAAATGAGACGTTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTATCAATGGTATCTG
AGCTCTCTACTTCGAGAGTGATGGTCTTACCGGTGAGAGTCTTAACGAAGATTTGCATCTAGACGAGGCAATACGATCGAGATAATAAAATAATCAGCCA
GCAATTTCTTAACAACAAGAATTACAATGTGTAAAAACAAAACAATAAAAGGACAGCATAAAGCAAAAGACCAAACGTGAAATTATACACTTTTAACATA
TAAGAAAACTGAAAAAATAGTTCAAGAAACCCTCTTAAGCAATCAATAAACCCTAGTAACAAAAAACACATGTATCTGTCTACAACAACATACACAGAAT
TAAAGCGAGCACAAAAAAGGTAAAGAATGAAAACACGAGACCCAGATAACTCTATTTCAATCATAAATTACCGAAACGGACGAAAAAACACCTTTGAACA
AATAAAAATAACAAGAAACTTCTCAGGATTATACAGTACAGAATACTTGTGGCAGATCTGACAAATTAAATATGTAATTTCATGAAATCACCTCCCGATC
GCTTCAACGAACCAATAATTTTAAACAAATCGAAGTAATAGTAAAGAAATTATTCAAAGAACAAAAACCCAGATCAAAATCAAAGGGCAATCCTTTATAA
GAAAGAATAAAAACCCTACAACCCGAAATTTATTCGAAAATAAAAGAGGTGGAAAAGGTACCTTGAAACGGTGAGCTAGGGTTTTCTTTCTTCTTCTGCT
ACAATTCTATTATGT