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Detailed information on CNT30120532


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 6e-157

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-109

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547563Citrus clementinaIpomoea triloba74.4292.7582.81640forward
CNT30330477Citrus clementinaDioscorea rotundata69.5383.5283.61598forward

Expression of CNT30120532

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MKGRLLLDVIIRKSPSILKLFASEDQTLLIRWNSFLVLDFCLDIVNCV*

>peptide 2 (46 aa)
EQTRRQADNILRIHHHEGGAQDGGWTPSECYNQLKYGHPQAASQQR*

>peptide 3 (33 aa)
NRHGGKQITFLEFTTTKAEHKMEGGLLLNVIIS*

>peptide 4 (35 aa)
MVSELSTSRVIVLPVKVFTKICISNRAFSCERRKN*

Sequence

>CNT30120532
AGAACAGACACGGCGGCAAGCAGATAACATTCTTAGAATTCACCACCACGAAGGCGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCAG
CTAAAGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTATC
AATAGTATCTGAGCTCTCCACCTCCAGAGTAATAGTCTTCCCAGTCAAGGTCTTGACAAATATCTGCATACCACCCCTCAGGCGCAGAACCAGATGAAGG
GTCGACTCCTTCTGGATGTTATAATCCGCAAGAGTCCTTCCATCCTCAAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGATCCGGTGGAATTCCTTCCT
TGTCTTGGATTTTTGCCTTGACATTGTCAATTGTGTCTGAGCTCTCAACTTCCAAAGTAATTGTTTTCCCAGTAAGGGTCTTAACAAATATCTGCATGCC
TCCCCTGAGACGAAGAACAAGGTGGAGAGTTGACTCTTTCTGAATGTTGTAATCGGCCAAGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCAAAGATAAGC
CTCTGCTGGTCCGGCGGAATTCCCTCCTTGTCTTGGATCTTGGCCTTTACGTTGTCGATGGTGTCCGAGCTCTCGACTTCGAGAGTAATAGTTTTGCCGG
TCAAGGTTTTCACGAAGATCTGCATATCGAACAGAGCTTTTTCTTGCGAACGAAGGAAGAATTGATAATTGTTGCGATCAAGATGATGAAATGATGAGTG
AAGCGCTAGAGGTTCGTGCTTGGTTATATAGCAAAGCTAACCGACTCGTTGAACGGTTCA