Detailed information on CNT30709517


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 3e-166

BLAST vs NONCODE:
NONTPRT002153, E-value = 6e-177

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532384Glycine maxEucalyptus grandis99.6862.5383.05926forward
CNT30701594Glycine maxQuercus lobata88.0579.7382.76818forward
CNT30279009Glycine maxChenopodium quinoa99.1460.2782.95921forward
CNT30379426Glycine maxManihot esculenta88.0570.6484.6818forward
CNT30406246Glycine maxBeta vulgaris71.4798.9685.54664forward
CNT30629220Glycine maxVigna unguiculata96.7783.2485.43899forward
CNT30200107Glycine maxPisum sativum94.8399.4487.85881forward
CNT30156103Glycine maxPistacia vera95.9175.2584.62891forward
CNT3096981Glycine maxSolanum tuberosum98.3981.3983.7914forward
CNT3086353Glycine maxVigna radiata100.1143.488.06930forward
CNT30511508Glycine maxSolanum lycopersicum100.1171.182.58930forward
CNT30172216Glycine maxTrifolium pratense91.3949.8286.57849forward
CNT30145394Glycine maxMedicago truncatula98.678.4986.57916forward
CNT30311152Glycine maxCamelina sativa98.1756.5484.21912forward
CNT30605737Glycine maxGossypium raimondii80.397.983.78746forward
CNT3066849Glycine maxLeersia perrieri91.2863.4783.49848forward
CNT30653057Glycine maxRosa chinensis81.4957.2286.13757forward
CNT30626303Glycine maxDaucus carota88.8135.7885.45825forward
CNT30480747Glycine maxArabidopsis halleri80.6264.5783.31749forward
CNT30423866Glycine maxPapaver somniferum97.0970.5282.48902forward
CNT30642981Glycine maxCannabis sativa91.1775.4983.47847forward
CNT3028051Glycine maxTheobroma cacao99.4675.884.52924forward
CNT3026527Glycine maxPopulus trichocarpa81.0577.0784.99753forward
CNT30120072Glycine maxCitrus clementina82.0265.5283.6762forward
CNT30330398Glycine maxDioscorea rotundata86.4485.5283.31803forward
CNT30603625Glycine maxOryza punctata80.356.983.65746forward
CNT30111662Glycine maxFicus carica96.7766.4983.54899forward
CNT30334108Glycine maxCynara cardunculus96.4538.4782.03896forward
CNT30724005Glycine maxLupinus angustifolius90.4265.0786.79840forward

Expression of CNT30709517

Peptides detected in this lncRNA

>peptide 1 (34 aa)
PSILQLLPSKYQPLLVWWDTLLVLDFCFDIIDCV*

>peptide 2 (63 aa)
VLPSSNCFPANINLCWSGGIPSLSWIFALTLSIVSELSTSKVIVLPVKVFTKICIPPLRRRTR*

>peptide 3 (40 aa)
MVSELSTSRVIVFPVRVLTKICIPPRRRRTKWRVDSFWML*

Sequence

>CNT30709517
GTCCTTCCATCCTCCAATTGCTTCCCAGCAAATATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATTTTTGCTTTGACATTATCGATTG
TGTCTGAGCTTTCAACTTCCAAGGTAATAGTCTTGCCTGTCAAAGTCTTCACAAAGATCTGCATACCTCCCCTGAGACGAAGGACAAGGTGAAGGGTGGA
CTCCTTTTGGATGTTGTAGTCTGCCAGTGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGAGGAATACCCTCCTTGTCT
TGGATCTTTGCCTTCACATTGTCAATTGTGTCTGAGCTCTCTACCTCCAAAGTAATGGTCTTCCCATAAGGGTCTTCACAAAGATTTGCATACCACCGCG
CAGACGGAGCACCAAGTGGAGGGTAGATTCTTTTTGGATGTTGTAATCAGCCAAGGTTCGGCCATCTTCAAGCTGTTTGCCAGCAAAAATGAGCCTCTGT
TGGTCTGGTGGGATACCTTCTTTGTCCTGAATCTTGGCTTTGACATTGTCAATAGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGAG
TCTTGACAAAGATTTGCATCCCACCACGAAGGCGGAGAACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGCAAGGGTACGGCCATCCTCAAG
CTGCTTTCCAGCAAAGATGAGCCTCTGTTGATCTGGTGGGATACCCTCTTTGTCCTGAATCTTAGCCTTAACATTGTCAATGGTGTCAGAGCTCTCCACC
TCAAGGGTGATTGTCTTTCCGGTCAGAGTCTTAACAAAGATTTGCATCCCACCACGGAGACGAAGAACCAAGTGGAGAGTGGACTCCTTTTGGATGTTAT
AATCAGCAAGGGTACGTCCATCCTCAAGC