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Detailed information on CNT30512897


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316367Juglans regiaCorylus avellana5499.0791.18533forward
CNT30701438Juglans regiaQuercus lobata88.3559.7788.88872forward
CNT30615959Juglans regiaSesamum indicum82.2749.2482.02812forward
CNT3020165Juglans regiaCitrullus lanatus77.7144.5481.62767forward
CNT3069548Juglans regiaQuercus suber57.558088.73568forward
CNT30525132Juglans regiaPhaseolus vulgaris83.8951.9883.21828forward
CNT30629221Juglans regiaVigna unguiculata81.3662.6482.94803forward
CNT3088525Juglans regiaVigna radiata76.4951.9682.65755forward
CNT30172216Juglans regiaTrifolium pratense85.9249.7781.6848forward
CNT30145430Juglans regiaMedicago truncatula82.2746.2482.76812forward
CNT30572860Juglans regiaVitis vinifera63.4267.8282.11626forward

Expression of CNT30512897

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSCIFALTLSIVSELSTSRVMVLPVKVFTKICIPPRKRSTKCSVDSFWIL*

>peptide 2 (49 aa)
PLKNGKETKGRSTKTIKNTSKLKARDTRLHHRTTTRLNNHHGGEEQGAK*

Sequence

>CNT30512897
GCCATTAAAAAATGGCAAGGAAACAAAGGGCAGATCTACAAAAACCATAAAGAACACCAGCAAATTGAAGGCCCGTGACACTAGACTTCACCATAGAACC
ACCACCCGGCTCAATAACCACCACGGAGGCGAAGAACAAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAATCCGCCAGAGTCCTCCCATCTTCAAGCTG
TTTCCCCGCGAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATCGTGTCAGAACTCTCTACCTCC
AAGGTAATGGTCTTCCCAGTCAATGTCTTCACAAATATCTGCATCCCACCACGCAAGCGCAGCACCAGATGTAGGGTAGATTCCTTCTGAATATTGTAAT
CTGCAAGAGTCCTCCCATCTTCTAGCTGCTTGCCTGCAAAGATAAGCCTTTGCTGGTCTGGAGGGATGCCCTCTTTGTCCTGTATCTTTGCCTTGACATT
GTCGATTGTATCCGAACTTTCAACCTCGAGAGTTATGGTTTTACCAGTCAAAGTCTTCACAAAAATCTGCATTCCGCCACGCAAACGCAGCACCAAGTGC
AGTGTCGATTCCTTTTGGATATTGTAATCTGCTAAGGTCCTTCCATCTTCTAACTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGGATACCTT
CTTTGTCTTGAATTTTAGCCTTCACATTATCAATAGTATCGGAACTCTCAACCTCCAAAGTTATAGTTTTTCCTGTCAGCGTCTTCACAAAAATTTGCAT
TCCACCTCGGAGACGGAGCACCAAGTGGAGGGTTGATTCCTTTTGGATATTATAGTCGGCAAGTGTCCGACCGTCTTCAAGTTGCTTGCCAGCAAAGATC
AACCTCTGTTGGTCTGGTGGGATACCCTCCTTGTCTTGGATCTTAGCCTTGACATTATCAATGGTGTCCGAGCTTTCGACTTCCAAA