Detailed information on CNT30695507


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9C5N2|TMN9_ARATH, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675797Oryza sativaSetaria viridis27.6646.4488.75320forward
CNT30378477Oryza sativaArabidopsis thaliana31.2960.4380.39362forward
CNT30729311Oryza sativaCorchorus capsularis8.9923.0681.73104forward
CNT30381565Oryza sativaManihot esculenta31.286.7879.22361forward
CNT30160060Oryza sativaPistacia vera51.8657.9279600forward
CNT30564723Oryza sativaActinidia chinensis26.118.5578.81302forward
CNT30314293Oryza sativaCamelina sativa7.2626.1784.5284forward
CNT30469220Oryza sativaSaccharum spontaneum91.0171.6390.221053forward
CNT30338263Oryza sativaEragrostis tef10.253.1581.36118forward
CNT30366513Oryza sativaSorghum bicolor22.4746.5183.46260forward
CNT30704258Oryza sativaPrunus avium17.0332.8381.22197forward
CNT3024022Oryza sativaPopulus trichocarpa15.2135.3485.23176forward
CNT30150459Oryza sativaBrachypodium distachyon21.9539.581.5254forward
CNT30103110Oryza sativaOryza rufipogon93.8672.6999.631086forward
CNT30577272Oryza sativaOryza barthii88.0799.5199.611019forward
CNT30112808Oryza sativaFicus carica17.5524.9781.77203forward
CNT3063675Oryza sativaSelaginella moellendorffii8.2128.3688.4295forward

Expression of CNT30695507

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MSSIAVINPPRFDGERKPKTANIMVTSSIPKNWTPVPT*

>peptide 2 (52 aa)
MKNSSMKTAPNGRIPPIRMVKAGFMYPACSGICLGILLVFTGASMAGFLKPR*

Sequence

>CNT30695507
AGCAACTCTGCGCCTAGTCAATCTTCACAGATGAGTAAATCAATCTCGTGAACCACAAGCAGGCACAGAAACCAATTGTGCCAGTGAGCACGAAGAAAGA
GAATGAGGCCAGAAGCATGTAGCCGAAGTACAGAATGCCTGACACCAGTTTAGTAATCTGCAGCTTGGTAAAGAAGTAGAACCCAGCATACAGGAAGAGA
TAGATCGCAGATGATCCTGAGGTGAGATAGGACCTCCACCACCACATGTAATCCTCACTGCACAGTTGGAAGTAGCACAGCACGATTGCAATCTCCGCAC
AAGTGATGATGAGGATAATGAACACGAGGAAAAGGAAGCCGAAGATGTAGTAAAACTGGTGAAGCCAGATTGAAGTGAGGATGAAAAATAGCTCAATGAA
AACTGCTCCGAATGGAAGAATCCCACCAATAAGAATGGTGAAGGCAGGGTTCATGTACCCAGCCTGCTCTGGGATCTGTCTCGGGATTTTGTTGGTCTTC
ACTGGAGCCTCAATGGCAGGTTTCTTGAAACCAAGATAGCTCCCAACAAAGACAAGTGGAACCGAGATACCGAACCAAAGAAGCACCAAGGCAAACATTG
TGGAGAAAGGGACAGCACCTGATGATTTCTCCCCCCATATAAGAGCATTCAAGACGAAGAAAATACCAAAAGCAATTCCCGGAAACAGGAAAGCAGTCTT
CAAGGTGATGCTCTTCCATTCTGATCCTTTAAACATCTTATAGAGTCGGGAAGAAGCATATCCAGCAAACAGCCCCATCAAGACCCAAATGAGCAGCATC
GCAGTCATCAATCCTCCACGGTTTGATGGAGAAAGGAAACCCAAGACAGCAAACATCATGGTAACCAGCAGCATACCAAAGAACTGGACACCAGTGCCAA
CATAGACACAGAGTAAGTCAGAGTTAGTTGGTGGGCGGAACACATCTCCATGAACAAGCTTCCAACCAGTTTCCTCCTGGGCTTCTTCTTCAGTCTCAAG
TTGATTGTACCTGGAGATATCTCTATATAGAGTGCGGAGCATGATCATGGCCACCATTCCAGATAAGAAAAGCACGATCATGAGAGAGTTCACAATAGAG
AACCAGTGAATTTGATCATCTGTCATAAGCAGATAGGTGTCCCAGCGAGAAGCCCAC