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Detailed information on CNT30150459


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695507Brachypodium distachyonOryza sativa39.521.9581.5254forward
CNT30671488Brachypodium distachyonSetaria viridis20.5333.4286.36132forward
CNT30549621Brachypodium distachyonIpomoea triloba32.0456.2881.07206forward
CNT30378260Brachypodium distachyonArabidopsis thaliana44.4861.6480.42286forward
CNT30729311Brachypodium distachyonCorchorus capsularis14.9321.2985.4296forward
CNT30490055Brachypodium distachyonOlea europaea27.0640.5682.18174forward
CNT3044799Brachypodium distachyonPrunus dulcis30.6435.8282.23197forward
CNT30160060Brachypodium distachyonPistacia vera27.5317.0883.05177forward
CNT30400175Brachypodium distachyonTriticum turgidum19.9139.7586.72128forward
CNT30443000Brachypodium distachyonAegilops tauschii50.3969.0886.11324forward
CNT30469220Brachypodium distachyonSaccharum spontaneum40.1217.5583.33258forward
CNT30137781Brachypodium distachyonLolium perenne33.5996.8682.87216forward
CNT30366513Brachypodium distachyonSorghum bicolor32.8137.7590.52211forward
CNT30704258Brachypodium distachyonPrunus avium20.8422.3382.84134forward
CNT3024022Brachypodium distachyonPopulus trichocarpa29.2437.7582.98188forward
CNT30102928Brachypodium distachyonOryza rufipogon39.526.9681.5254forward
CNT30577272Brachypodium distachyonOryza barthii39.524.880.71254forward
CNT30112808Brachypodium distachyonFicus carica24.4219.3184.71157forward
CNT3063675Brachypodium distachyonSelaginella moellendorffii23.3344.7882150forward

Expression of CNT30150459

Peptides detected in this lncRNA

>peptide 1 (99 aa)
QNEEKRAKITELAMILQSWITISPVHLNNQLSNSELMPQIAKFRGPIAFTVHSIQLHRGNKELGRRALRLLNLHRRINQPGEHEACIESNCTRQGKECI*

>peptide 2 (70 aa)
MEVRIKKSSMNTAPNGRIPPIRIEKIGFMYQACSGTCLGILFVFTGSSMAGFLKPRKLPTKTNGTEIPNQR

Sequence

>CNT30150459
CCAAAATGAGGAAAAGAGAGCAAAAATCACTGAGCTAGCTATGATACTTCAGTCATGGATTACAATATCACCAGTTCATCTTAACAACCAGCTTTCAAAC
TCAGAACTGATGCCCCAAATAGCTAAATTTAGAGGACCTATAGCATTCACTGTCCACAGCATCCAACTTCACCGTGGCAACAAAGAATTAGGCAGAAGGG
CACTCCGTTTACTCAATCTTCACAGACGAATAAATCAGCCTGGTGAACATGAAGCATGCATAGAATCCAATTGTACCCGTCAAGGCAAAGAATGCATATG
ACGCGATAAGCATGTATCCGAAGTACAGGACAGCTGACACAAACTTTGTAATTTCCAGCTTAGTGAAGAAGTAGAAGGTCGCATACAGGAAGAGGAACCC
AAAGATGTAATAAAATTGATGCAGCCAGATGGAGGTCAGGATAAAAAAGAGCTCAATGAACACAGCTCCAAATGGAAGGATCCCTCCAATCAGAATTGAG
AAGATTGGGTTCATGTACCAGGCCTGCTCAGGTACCTGCCTAGGTATCTTGTTTGTCTTCACAGGGTCTTCAATGGCAGGTTTCTTGAAACCAAGGAAAC
TCCCAACAAAAACTAACGGCACTGAGATACCAAACCAAAGGAG