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Detailed information on CNT30564723


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695507Actinidia chinensisOryza sativa18.5526.178.81302forward
CNT30671488Actinidia chinensisSetaria viridis18.3775.780.94299forward
CNT30375191Actinidia chinensisArabidopsis thaliana15.675.1582.68254forward
CNT30406390Actinidia chinensisBeta vulgaris8.9734.7684.93146forward
CNT30490055Actinidia chinensisOlea europaea15.9760.6184.23260forward
CNT3044799Actinidia chinensisPrunus dulcis8.112484.85132forward
CNT30314293Actinidia chinensisCamelina sativa14.1971.9679.65231forward
CNT30469220Actinidia chinensisSaccharum spontaneum18.5520.5480.13302forward
CNT30102839Actinidia chinensisOryza rufipogon18.5525.3878.81302forward
CNT3063675Actinidia chinensisSelaginella moellendorffii6.0229.2582.6598forward

Expression of CNT30564723

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MIIQDDSLSQPRGYIPSHIARIQTVICYTYSDSERLQAYSDSKVAHAINSQCQWF*

>peptide 2 (72 aa)
MKNSSMKTAPNGRMPPXGVGKHLWKLINEIKQDKNKTENTRVILPTETKVQNSRYLLSKSKSSSLQSQINSY*

Sequence

>CNT30564723
CAGAGGAAAGCAAAGTAAAAGCTGAAAAAGTTTAAATCGGCTCTTGTTTTTTGAGATTTTGCATATACATTCAGGCTTCTAACTTGTTATAGGCATAATT
ATCCATCTCTTTTATTCACTTAAATGTAGCCCCCACATGCAAAATGATTATACAAGATGATAGCTTGTCTCAGCCTAGAGGCTACATACCCTCTCATATT
GCCCGTATTCAAACCGTAATATGTTATACATATTCAGATTCTGAGAGACTCCAAGCATATTCGGATTCCAAGGTGGCTCATGCTATTAATTCACAATGCC
AATGGTTTTAGCTACCATATCGTGAAACTTTATGACAAAACTATACTAAACCATCTGGCATAGAAACTACTAAAAGTACAGTTCATAACAATTGATACCA
GTGTAAACAAAAAGACAACATTACAAGCCAAGCCCTGCACTACCGATAGCAAAATGGAAAAGCTTTGGTGAGGTTGGAAAACTTTCCTGAACGTAGCAGT
TATCCAATAGAGATGTAGATGCTTTTGCCTGCCTCGTTCCAGGTATCGTGACAATCCGCCCTTATCGATACATTAAGCAGAGAGCTCTTTTGCAATCTTC
ACATCAGTCTATCTTCACAGAGGAATAGATCTTCCGCACAAACCAGAAGCAAGCGTAGAAGCCAATTGTACCCGTCAAGACAAAGAAGGCATATGAGCCG
ATTAACATATAGCCAAAGTACAAGATGCCTGAAACCAGCTTAGTGATCTCCAACTTGGTGAAGAAGTAGAAGACAGAGTAAAGAAAGAGGTAAAAAGCGG
AGGACCCAGCGGTCAGGTAAGCCCTCCACCACCAGTGGTAGTCTTCACTGCACAATTGGAAATAGCAGAGCACAATAGTTATCTCAGCACAAGTGATTAT
AAGGATGACGAAAACTATGAAAAGGAATCCAAAGATGTAGTAGAACTGATTTAGCCATATCGATGTCAAGATGAAGAACAGCTCAATGAAAACAGCCCCA
AATGGAAGAATGCCTCCANGGGGGGTGGGGAAGCATCTGTGGAAACTCATAAACGAAATAAAACAGGACAAAAACAAAACAGAAAACACTCGGGTTATTC
TGCCAACAGAAACTAAAGTTCAGAACTCCAGATATTTATTATCCAAAAGTAAAAGTAGCTCATTGCAAAGCCAGATCAACTCATATTAAAAGAAAGAACT
TTCTTGATTAAGGATATTTTGAAGAGGTAACTTCGAATAAATCCATCCCTGGGAGCCTGGGTTGTTATTCTTTTCACAAGGGAAACAATAGAAAAAGAAA
AAAGAGGTTTTCACCTGGATTATTCCTTTGTCAACATTCCAGTATCTTAATCTATTCACTAAAAACTATGTTACATGGACTTGGGGTCATCTAATTCCCT
GACACTTTGACACAGCAGAAATATACCAAGTGTCGGAGTCATCCAATTCCCACATCAAGGATACTTGGGCACGGCAATTCATATTTCTTAGTATATTTTT
TTATTTTCGAGGCCGAGTAGTGTTTACTAGGTGTCAACACATATTTCACGCATAGTTTAATAGTTTTAACATATTTTCTTTGTGAACTTGCATTACTAGT
CTATATACGCTTTTTAAGTCAATGCCCA