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Detailed information on CNT3063675


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695507Selaginella moellendorffiiOryza sativa28.368.2188.4295forward
CNT30671488Selaginella moellendorffiiSetaria viridis30.4525.8290.2102forward
CNT30378477Selaginella moellendorffiiArabidopsis thaliana23.8813.3692.580forward
CNT30490055Selaginella moellendorffiiOlea europaea31.0424.2484.62104forward
CNT3044799Selaginella moellendorffiiPrunus dulcis43.5826.5580.82146forward
CNT30160060Selaginella moellendorffiiPistacia vera45.9714.8685.06154forward
CNT30564723Selaginella moellendorffiiActinidia chinensis29.256.0282.6598forward
CNT30314293Selaginella moellendorffiiCamelina sativa43.5845.4884.93146forward
CNT30469220Selaginella moellendorffiiSaccharum spontaneum26.876.1287.7890forward
CNT30366513Selaginella moellendorffiiSorghum bicolor30.4518.2582.35102forward
CNT30704258Selaginella moellendorffiiPrunus avium27.7615.588.1793forward
CNT3024022Selaginella moellendorffiiPopulus trichocarpa31.6421.2982.08106forward
CNT30150459Selaginella moellendorffiiBrachypodium distachyon44.7823.3382150forward
CNT30102928Selaginella moellendorffiiOryza rufipogon46.8716.6784.71157forward
CNT30577272Selaginella moellendorffiiOryza barthii28.369.2888.4295forward

Expression of CNT3063675

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MEVRMKKSSMKTAPNGRMPPMSTEKMGCMYHACSGTCR

Sequence

>CNT3063675
GAGGCGTAAATGGTGCGAACAAACCATAAGCATGCGTAGAACCCGATGGTGCCAGTGAGGACGAAGAAGCCAATCGAGATGATGGTCATGTAGCCAAAGT
AGAGCAGCCCCGACACCAGCTTGGTGATCTCCAGCTTGGTGAAGAAGTAGAAGGTTGCGTAGAGGAACAAGAAGACGATGAAGAGGAAGCCGAAGATGTA
GTAGAACTGGTGCAGCCAGATGGAGGTGAGGATGAAGAAGAGCTCGATGAAAACGGCGCCGAATGGAAGGATGCCGCCGATGAGCACCGAGAAGATGGGC
TGCATGTACCACGCCTGCTCTGGGACCTGTCGCGG