Detailed information on CNT30131664


BLAST search results

BLAST vs Swiss-Prot:
sp|P10708|CB12_SOLLC, E-value = 2e-48

BLAST vs NONCODE:
NONBNAT006615, E-value = 5e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695011Lolium perenneOryza sativa104.1210090.91253forward
CNT30520455Lolium perenneSetaria italica10045.6890.95243forward
CNT30220915Lolium perenneHordeum vulgare63.7968.2894.19155forward
CNT30659042Lolium perenneTriticum dicoccoides83.9569.6295.59204forward
CNT30681050Lolium perenneTriticum urartu98.77102.5693.33240forward
CNT30102835Lolium perenneOryza rufipogon27.166.2287.8866forward
CNT30577305Lolium perenneOryza barthii27.167.2587.8866forward
CNT30580975Lolium perenneEchinochloa crusgalli100101.6790.95243forward
CNT30556637Lolium perennePanicum hallii71.197993.64173forward

Expression of CNT30131664

Peptides detected in this lncRNA

>peptide 1 (80 aa)
VPDVGAGELVVGEDGDELHDEERRGVGEVLLLAGGVPRRRVEDADLGQELRDEDTRRSQHRPPAVHQLRLHVPPQALGVRS

>peptide 2 (79 aa)
YPTSVPVSLLLGKMGMSSTTKSVVVSVKYSCSPAVYHDGVLRMPILVRSSGMKIPAAPSIAHRQCTSSACTFHRKLSGSD

Sequence

>CNT30131664
GTACCCGACGTCGGTGCCGGTGAGCTTGTTGTTGGGGAAGATGGGGATGAGCTCCACGACGAAGAGCGTCGTGGTGTCGGTGAAGTACTCCTGCTCGCCG
GCGGTGTACCACGACGGCGTGTTGAGGATGCCGATCTTGGTCAGGAGCTCCGGGATGAAGATACCCGCCGCTCCCAGCATCGCCCACCGGCAGTGCACCA
GCTCCGCCTGCACGTTCCACCGCAAGCTCTCGGGGTCCGATCC