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Detailed information on CNT30592972


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691552Eragrostis curvulaOryza sativa39.1216.2388.03142forward
CNT30670711Eragrostis curvulaSetaria viridis28.9324.3194.29105forward
CNT30177347Eragrostis curvulaSecale cereale33.0622.7385120forward
CNT30286106Eragrostis curvulaTriticum aestivum26.7232.1287.6397forward
CNT30225206Eragrostis curvulaHordeum vulgare28.147.6685.29102forward
CNT30553532Eragrostis curvulaOryza glaberrima41.3219.7686.67150forward
CNT30435636Eragrostis curvulaAegilops tauschii35.2618.5585.94128forward
CNT30254575Eragrostis curvulaAvena sativa37.7412.8690.51137forward
CNT30459402Eragrostis curvulaSaccharum spontaneum26.1719.2391.5895forward
CNT30135526Eragrostis curvulaLolium perenne27.2711.5988.8999forward
CNT30345245Eragrostis curvulaEragrostis tef28.13092.16102forward
CNT30364646Eragrostis curvulaSorghum bicolor44.914.8595.09163forward
CNT30149709Eragrostis curvulaBrachypodium distachyon28.933587.62105forward
CNT30100237Eragrostis curvulaOryza rufipogon44.0810.0395.62160forward
CNT30583892Eragrostis curvulaEchinochloa crusgalli31.1319.1593.81113forward

Expression of CNT30592972

Peptides detected in this lncRNA

>peptide 1 (81 aa)
SYTVISNCSFLSRYTLFFVFFCIPCLLASCVAQQSGRGSPFHSLRHSSSGSMCLFWFMATSTLFSSSPGRARRRRWRARAR*

>peptide 2 (92 aa)
QLHSNIELLILEPLYFVFCFLLYTLSSRVLCGSAERQGLAVPLLEALEQWVDVLVLVHGHEHLVQLLSRTRSASPLASACSMSTARSFCISG*

Sequence

>CNT30592972
CCAGCTACACAGTAATATCGAACTGCTCATTCTTGAGCCGCTATACTTTGTTTTTTGTTTTCTTCTGTATACCTTGTCTTCTCGCGTCTTGTGTGGCTCA
GCAGAGCGGCAGGGGCTCGCCGTTCCACTCCTTGAGGCACTCGAGCAGTGGGTCGATGTGCTTGTTCTGGTTCATGGCCACGAGCACCTTGTTCAGCTCC
TCTCCAGGACGCGCTCGGCGTCGCCGTTGGCGAGCGCGTGCTCGATGAGCACCGCGCGGAGCTTCTGCATCAGCGGGTAGTTGGGGCTGCACGGGTCGTC
CGCGTACGCGAACACCGCCTCGCGGTCGATCGCGGTGACCAGGTCCTTCTCGCAGAAGCGCGC