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Detailed information on CNT30286106


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691552Triticum aestivumOryza sativa33.7711.6689.22102forward
CNT30533290Triticum aestivumEucalyptus grandis29.477.4487.6489forward
CNT30177347Triticum aestivumSecale cereale85.148.6779.38257forward
CNT30225885Triticum aestivumHordeum vulgare35.132.4285.85106forward
CNT30553532Triticum aestivumOryza glaberrima35.4314.186.92107forward
CNT30435636Triticum aestivumAegilops tauschii10043.7799.01302forward
CNT30242796Triticum aestivumAvena sativa96.6971.0584.93292forward
CNT30466309Triticum aestivumSaccharum spontaneum35.4315.4284.11107forward
CNT30135526Triticum aestivumLolium perenne10035.3685.1302forward
CNT30364646Triticum aestivumSorghum bicolor35.19.6587.74106forward
CNT30100429Triticum aestivumOryza rufipogon99.6722.279.4301forward
CNT30592972Triticum aestivumEragrostis curvula32.1226.7287.6397forward

Expression of CNT30286106

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MAWHKATMKVEDMSLSMSMASAVFLEEIRPREL

>peptide 2 (99 aa)
HQRVVGAARVVCIREHRLTVNREQQVLLAESRIVEVPIVGGAQCLPGRHLHTALDGILNILLQMAEVDGLAQGDHESRGHELEYVNGLGGLPGGDKTKRV

Sequence

>CNT30286106
GCATCAGCGGGTAGTTGGCGCTGCAAGGGTCGTCTGCATACGCGAACACCGCCTCACGGTCAATCGTGAGCAGCAGGTCCTTCTCGCAGAATCGCGCATT
GTGGAGGTGCCCATTGTTGGTGGTGCTCAATGTCTTCCTGGCCGTCATCTTCACACAGCTCTTGACGGCATCCTTAACATTCTCCTCCAGATGGCGGAGG
TCGATGGCCTGGCACAAGGCGACCATGAAAGTAGAGGACATGAGCTTGAGTATGTCAATGGCCTCGGCGGTCTTCCTGGAGGAGATAAGACCAAGAGAGT
TG