Detailed information on CNT3070359


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535611Quercus suberEucalyptus grandis97.711.8582.55298forward
CNT30515000Quercus suberJuglans regia21.3110.2786.1565forward
CNT30196423Quercus suberPisum sativum29.1838.0391.0189forward
CNT30712354Quercus suberGlycine max29.1819.3186.5289forward
CNT30223246Quercus suberHordeum vulgare25.2530.284.4277forward
CNT30394524Quercus suberTriticum turgidum29.1824.1887.6489forward
CNT30146221Quercus suberMedicago truncatula23.2811.3185.9271forward
CNT30134912Quercus suberLolium perenne25.2514.0885.7177forward
CNT304903Quercus suberZea mays66.5641.5183.74203forward
CNT30712935Quercus suberMalus domestica golden29.8438.487.9191forward
CNT30625077Quercus suberDaucus carota34.130.1482.69104forward
CNT30722154Quercus suberTriticum spelta20.3327.5688.7162forward
CNT30424411Quercus suberPapaver somniferum61.6423.4183.51188forward
CNT30572753Quercus suberVitis vinifera57.712.5381.82176forward
CNT30582481Quercus suberEchinochloa crusgalli56.0736.785.38171forward
CNT30724228Quercus suberLupinus angustifolius19.3428.588.1459forward

Expression of CNT3070359

Peptides detected in this lncRNA

>peptide 1 (34 aa)
DIKTSNDTGILGSLTLRVIEVCWNSDHCILDLET*

Sequence

>CNT3070359
ATGACATTAAGACCAGCAATGACACCGGCATCCTTGGTAGCCTGACGCTGAGAGTCATTGAAGTATGCTGGAACAGTGACCACTGCATTCTTGATTTGGA
AACCTAGGTAAGCCTCAGCAATCTCACGCATCTTCATTAGAACCATGGATGAGATTTCTTCAGCAGCAAATTGCTTCTCCTCACCCTTGTAGTTGACACA
AATCATGGGTTTCTCGCCAGGTCCATTAAAGACCTTGAATGGCCACAATTTAATATCACTCTGAACTGAGGCATCACTAAATCTCCGTCCAATCAACCTC
TTGGC