Detailed information on CNT30722154


BLAST search results

BLAST vs Swiss-Prot:
sp|P09189|HSP7C_PETHY, E-value = 2e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535611Triticum speltaEucalyptus grandis54.224.8583.61122forward
CNT3070359Triticum speltaQuercus suber27.5620.3388.7162forward
CNT30196423Triticum speltaPisum sativum31.5630.3484.5171forward
CNT30394524Triticum speltaTriticum turgidum42.2225.8297.8995forward
CNT304903Triticum speltaZea mays31.5614.5285.9271forward
CNT30367262Triticum speltaSorghum bicolor39.5614.2285.3989forward
CNT30570947Triticum speltaVitis vinifera57.3352.2382.95129forward
CNT30582481Triticum speltaEchinochloa crusgalli49.7824.0386.61112forward

Expression of CNT30722154

SRR9114152: 0.0 RPKM

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MRTMEEISSAENCLSAGPGITLYGHILISLWTGASANLLPIRRFA

Sequence

>CNT30722154
CTGGGAATCATTGAAGTAAGCAGGCACGGTGACAACAGCATTCTTAATAGTTACTCCTAGGTAAGCCTCGGCGATCTCACGCATCTTGATGAGGACCATG
GAAGAAATTTCTTCAGCTGAAAACTGCTTGTCTGCTGGGCCAGGAATAACCTTGTACGGCCACATCTTAATATCACTCTGGACAGGAGCATCAGCAAACC
TTCTGCCGATAAGACGCTTCGCATC