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Detailed information on CNT30561726


BLAST search results

BLAST vs Swiss-Prot:
sp|P29795|PSBP_SOLLC, E-value = 2e-63

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372941Actinidia chinensisArabidopsis thaliana36.1218.5181.36177forward
CNT30631059Actinidia chinensisVigna unguiculata25.5133.9782.4125forward
CNT30712300Actinidia chinensisGlycine max34.0820.5780.84167forward
CNT30290454Actinidia chinensisTriticum aestivum23.0652.3187.61113forward
CNT30387265Actinidia chinensisTriticum turgidum22.8619.8687.5112forward
CNT30554351Actinidia chinensisOryza glaberrima33.2724.3683.44163forward
CNT30244221Actinidia chinensisAvena sativa22.4521.787.27110forward
CNT30313622Actinidia chinensisCamelina sativa23.8819.0283.76117forward
CNT30133222Actinidia chinensisLolium perenne22.4512.1584.55110forward
CNT30610134Actinidia chinensisGossypium raimondii31.4364.9885.06154forward
CNT30624588Actinidia chinensisDaucus carota16.5340.187.6581forward
CNT30680245Actinidia chinensisTriticum urartu23.0624.387.61113forward
CNT30356129Actinidia chinensisLactuca sativa27.9634.1686.13137forward
CNT30583062Actinidia chinensisEchinochloa crusgalli27.9617.6385.4137forward
CNT30117183Actinidia chinensisOryza nivara24.918.0581.15122forward

Expression of CNT30561726

Peptides detected in this lncRNA

>peptide 1 (29 aa)
IPLSTLSSSVTRTSKHHIIIGVFLFLFLH*

Sequence

>CNT30561726
ATCCCATTAAGCACATTATCTTCCTCTGTCACTAGAACAAGCAAACATCACATAATTATAGGTGTTTTTTTGTTTCTTTTTTTGCATTGAAAATTTTCAA
GCAACACTGAACGAGCTAGCAGTGCTCTCCACAAACTTCCTAGCTCCTTTGAACCATCTCTTGTCTCCTGCTTGGGCCTTGCAAATGTAGAGCTTACCGT
CGGCCACCGTAGCAGTGATCAGCTGGTGCTTCCCGCCCTCGTCTCCGTCGGCCGTCCTCGTCAACACCGACAACGAGTAATATTGTTTGCCCCCGATCAC
CGGAGTCGCTTCTTACCTCAGATTGAGTTTTTCCAGAGTAGGGGTGATCATGACGGCAACCATGGTGGTGGTGTCGAAGTTGTCCTCGTACCTTAAAACC
TGACCTGGGTATTCCACCTCCTTGCTAGGGTTCCATTTTGCCGGAAGCTGAATCTTGAATCCATTTCCATTGTATGGAATGAAGTCTGTG