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Detailed information on CNT30356129


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673818Lactuca sativaSetaria viridis23.6924.9383.1695forward
CNT30521507Lactuca sativaSetaria italica27.9328.4383.04112forward
CNT30372941Lactuca sativaArabidopsis thaliana35.6614.9683.22143forward
CNT30709770Lactuca sativaGlycine max32.176.6280.62129forward
CNT30290454Lactuca sativaTriticum aestivum28.1852.3183.19113forward
CNT30387265Lactuca sativaTriticum turgidum27.9319.8683.04112forward
CNT30561726Lactuca sativaActinidia chinensis34.1627.9686.13137forward
CNT3088598Lactuca sativaVigna radiata33.172881.95133forward
CNT30510234Lactuca sativaSolanum lycopersicum22.6914.7783.5291forward
CNT30554351Lactuca sativaOryza glaberrima28.1816.8982.3113forward
CNT30244221Lactuca sativaAvena sativa27.4321.782.73110forward
CNT30133222Lactuca sativaLolium perenne27.4312.1581.82110forward
CNT30680245Lactuca sativaTriticum urartu28.1824.383.19113forward
CNT30583062Lactuca sativaEchinochloa crusgalli28.1814.5484.07113forward
CNT30557390Lactuca sativaPanicum hallii27.4316.1882.73110forward

Expression of CNT30356129

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MKTMMICRLGLREHGNMKWQPWLWWREEAVVW

>peptide 2 (45 aa)
MTMSWLGLIGAWRDEDDDDLQAGVERAWKHEVAAMVVVERGGGGLV

Sequence

>CNT30356129
TCCTCATGTAATGCAAAAGGGTCCTTATATTGATTAAGTTTAGACAATTTATCCACATTCCACTTGATCAAAGAAACACAAACGTCTCAAGGAATTTGAT
GAGCTGCCTTCAACAAATTTCTTTGCTCCTTTGAACCATCTCTTGTCACCCGCTTGCGCCTTGCAGATGTAAAGTTTTCCGTCAGACACAGTGGCGGTGA
TCAGTTGATGCTTACCACCCTCGTCTCCATCGGCCGTCCTCGTTAACACAGACAACGAGTAGTATGACGATGAGTTGGTTGGGCTTGATCGGAGCCTGGC
GGGATGAAGACGATGATGATCTGCAGGCTGGGGTTGAGAGAGCATGGAAACATGAAGTGGCAGCCATGGTTGTGGTGGAGAGAGGAGGCGGTGGTTTGGT
G