Detailed information on CNT30624588


BLAST search results

BLAST vs Swiss-Prot:
sp|O49080|PSBP_FRIAG, E-value = 6e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372941Daucus carotaArabidopsis thaliana68.8114.5481.29139forward
CNT30631059Daucus carotaVigna unguiculata39.1121.4783.5479forward
CNT30709770Daucus carotaGlycine max65.846.8381.2133forward
CNT30561726Daucus carotaActinidia chinensis40.116.5387.6581forward
CNT30313622Daucus carotaCamelina sativa66.3421.7982.09134forward
CNT30610345Daucus carotaGossypium raimondii67.3353.1285.29136forward
CNT30557390Daucus carotaPanicum hallii36.6310.8885.1474forward

Expression of CNT30624588

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MDFLSVGRTMTERLLVVSKLSSNLRTCPGNSTSLLGFHFAGINRVKSFPV*

Sequence

>CNT30624588
CCTCTGAAGCAGTCTTGCCGAAGTAGGGGAACCGTAGTCGGTGATGGACTTCTTGTCGGTTGGGAGGACCATGACTGAAAGGTTGCTGGTGGTGTCGAAG
TTGTCTTCGAATCTAAGAACCTGTCCCGGGAATTCCACCTCCTTGCTTGGGTTCCATTTTGCAGGAATCAACAGAGTGAAATCTTTTCCAGTGTAGGGCA
TA