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Detailed information on CNT30631059


BLAST search results

BLAST vs Swiss-Prot:
sp|P29795|PSBP_SOLLC, E-value = 4e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372941Vigna unguiculataArabidopsis thaliana54.8921.1380.2202forward
CNT30709815Vigna unguiculataGlycine max47.0137.2889.02173forward
CNT30561726Vigna unguiculataActinidia chinensis33.9725.5182.4125forward
CNT3088597Vigna unguiculataVigna radiata14.9520.2292.7355forward
CNT30313622Vigna unguiculataCamelina sativa50.2730.0881.62185forward
CNT30610345Vigna unguiculataGossypium raimondii28.2640.6282.69104forward
CNT30624588Vigna unguiculataDaucus carota21.4739.1183.5479forward
CNT30727018Vigna unguiculataLupinus angustifolius54.0829.5786.43199forward

Expression of CNT30631059

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MARNLCWTLEPTAAAPMSTVRAKRREIGAASSSWGVCF*

>peptide 2 (72 aa)
MDFLSVGVTVTTTLLVVSKLSSYLRTWPVYSTSLLGFHFEGIDSLNPFPLYGKKSVLDFGANSSSTNEHSES*

Sequence

>CNT30631059
CTTCGGGTGAACCATAGTCAGTGATGGACTTCTTATCAGTTGGAGTCACTGTGACAACGACATTGCTGGTTGTGTCAAAGTTATCCTCGTATCTAAGAAC
CTGGCCTGTGTACTCAACCTCTTTGCTAGGGTTCCATTTTGAGGGAATCGATAGTTTGAATCCATTTCCATTGTATGGCAAGAAATCTGTGTTGGACTTT
GGAGCCAACAGCAGCAGCACCAATGAGCACAGTGAGAGCTAAACGGCGAGAGATAGGAGCAGCATCATCCTCTTGGGGTGTCTGTTTCTGAGCCTTGCAC
ACGAGATGGTTGGGCTTGGTGCTAACCATGGTGCGTTGTGATGGGGATCTGGCTGGGGTGGTGAGGGC