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Detailed information on CNT30496441

BLAST search results

BLAST vs Swiss-Prot:
sp|Q9S7M0|CB3_ARATH, E-value = 4e-141

BLAST vs NONCODE:
NONBNAT003428, E-value = 7e-22

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30671892	Digitaria exilis	Setaria viridis	48.09	83.73	92.33	391	forward
CNT30520579	Digitaria exilis	Setaria italica	72.32	55.58	92.86	588	forward
CNT30156649	Digitaria exilis	Pistacia vera	58.06	30.67	80.72	472	forward
CNT30243592	Digitaria exilis	Avena sativa	74.05	77.88	87.71	602	forward
CNT30454234	Digitaria exilis	Saccharum spontaneum	50.68	55.68	93.45	412	forward
CNT30132148	Digitaria exilis	Lolium perenne	53.01	48.16	88.63	431	forward
CNT3013298	Digitaria exilis	Zea mays	74.42	70.1	93.06	605	forward
CNT30362471	Digitaria exilis	Sorghum bicolor	26.57	48.87	94.91	216	forward
CNT30370632	Digitaria exilis	Oryza glumipatula	37.39	39.48	91.45	304	forward
CNT3035078	Digitaria exilis	Cucumis melo	39.11	33.33	85.22	318	forward
CNT30148203	Digitaria exilis	Brachypodium distachyon	56.83	78.31	85.93	462	forward
CNT30581304	Digitaria exilis	Echinochloa crusgalli	69.74	60.64	93.12	567	forward
CNT30604338	Digitaria exilis	Oryza punctata	45.51	54.73	92.43	370	forward
CNT30556551	Digitaria exilis	Panicum hallii	52.89	72.88	94.19	430	forward

Expression of CNT30496441

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRKPSTRPMRMTWNPSTARMLCACTRFGLPR*

>peptide 2 (36 aa)
MENMARRPFLISFTLSSAKVTGSSASPRGSKYWPPG*

>peptide 3 (35 aa)
WIINKNSTESISGAHRQVTTDTKHTANPKTPPAQS*

>peptide 4 (36 aa)
MQPSAPSIAHRPWITSSALLRANASGSAESPAVSQP*

Sequence

>CNT30496441
TATGGATCATAAATAAAAACAGCACAGAATCAATTTCAGGAGCACACAGGCAAGTCACAACTGACACCAAGCACACTGCAAACCCAAAAACTCCTCCAGC
ACAGTCCTGAATCCTGAGATCACAGTATCTGCATTCATTGGTGGTACAATGGTGGTGTTACAAACGAGTAGTCTACACTGGTGGCCCGAAGGAAGAGGTC
GTCTAGCTGCTTAAGACCCTGGCGTTGTTGGCGACGGGGTCGTCGAGGTGGTCGAGCAGGTTCTCCAGTGGCCCCTTGCCGGTGACAATAGCCTGCACGA
AGAAGCCGAACATGGAGAACATGGCGAGGCGGCCATTCTTGATCTCCTTCACCTTGAGCTCGGCGAAGGTGACGGGGTCGTCGGCGAGTCCCAGGGGGTC
AAAGTATTGGCCGCCGGGGTAGAGGTTGTTGCCCTCGCCGACGCCGTCGAGGCCATTGATGCGGAAGCCCTCGACGAGGCCCATGAGGATGACCTGGAAC
CCCAGCACGGCGAGGATGCTCTGCGCGTGCACGAGGTTTGGGTTGCCGAGGTAGTCGAGCCCTCCCTCGGAGAAGATCTGAGCTCCGGCCTTGAACCACA
CGGGCTCCTTGAAGTCGACGCGCACCCACTTCTCGAGCACCTCGGGTGTGATGCAGCCGAGTGCTCCGAGCATCGCCCACCGGCCGTGGATCACCTCCAG
CGCCCTGTTGCGCGCGAACGCCTCCGGGTCGGCGGAGAGCCCCGCCGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGGTAGGAGGGTGTCTGG
GCTGAGAATGGGC