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Detailed information on CNT30360483


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SUI4|PSAL_ARATH, E-value = 2e-49

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533721Lactuca sativaEucalyptus grandis61.4238.5480.3269forward
CNT30516978Lactuca sativaJuglans regia22.3714.3783.6798forward
CNT30376279Lactuca sativaArabidopsis thaliana71.4652.5281.47313forward
CNT30730016Lactuca sativaCorchorus capsularis21.6914.3586.3295forward
CNT30507461Lactuca sativaNicotiana attenuata49.0959.3983.72215forward
CNT30635301Lactuca sativaCapsicum annuum47.7252.6484.21209forward
CNT3094038Lactuca sativaSolanum tuberosum49.0934.5183.26215forward
CNT30238125Lactuca sativaBrassica oleracea25.579.5684.82112forward
CNT30172489Lactuca sativaTrifolium pratense21.237.2187.193forward
CNT30614377Lactuca sativaArabis alpina25.5743.2486.61112forward
CNT30610860Lactuca sativaGossypium raimondii16.2124.0787.3271forward
CNT30217087Lactuca sativaKalanchoe fedtschenkoi44.2918.6779.9194forward
CNT30129085Lactuca sativaCorymbia citriodora36.071583.54158forward
CNT30570425Lactuca sativaVitis vinifera22.155.5883.5197forward
CNT30644515Lactuca sativaCannabis sativa7153.8181.99311forward
CNT3027985Lactuca sativaTheobroma cacao49.5439.9680.18217forward
CNT30725036Lactuca sativaLupinus angustifolius31.5121.4382.61138forward

Expression of CNT30360483

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MLRITTSPPAASDPAAPAYSVFLNGPAFTNGPTRKNPWASHGRCLLSPISSVLNITYYDHLLHKFVGLPSKMI

>peptide 2 (52 aa)
TMGCLKLVKNIKKEKSPSDTGDPTKKESTSELSPTIGCLKLVRLFLPPGQSQ*

>peptide 3 (29 aa)
MGLLSQMGPLGRTHGLAMVDACCPQFLQF*

Sequence

>CNT30360483
CAACCATGGGTTGTTTGAAGTTGGTCAAGAACATAAAGAAGGAAAAAAGCCCAAGTGACACCGGAGATCCCACCAAAAAAGAATCCACCAGTGAACTTAG
CCCAACCATCGGCTGTTTGAAGTTGGTCAGGTTGTTTCTTCCTCCCGGTCAAAGTCAATGATGGTGCAATCGACGGTTCACCTTCTTTGAATGATGCGAT
TCCATACATAGTCAAGCAAATGCTAAGGATCACCACAAGCCCACCCGCGGCTAGTGATCCTGCTGCACCTGCATACTCTGTGTTCCTTAATGGGCCTGCT
TTCACAAATGGGCCCACTAGGAAGAACCCATGGGCTAGCCATGGTCGATGCTTGTTGTCCCCAATTTCTTCAGTTTTGAATATAACTTATTATGACCATT
TACTTCACAAATTTGTGGGTTTGCCTTCAAAGATGATT