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Detailed information on CNT30217087


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39654|PSAL_CUCSA, E-value = 2e-70

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533721Kalanchoe fedtschenkoiEucalyptus grandis19.5429.0880.79203forward
CNT30376279Kalanchoe fedtschenkoiArabidopsis thaliana21.5637.5880.36224forward
CNT30730016Kalanchoe fedtschenkoiCorchorus capsularis25.0239.2778.85260forward
CNT30712288Kalanchoe fedtschenkoiGlycine max11.9321.4980.65124forward
CNT30635301Kalanchoe fedtschenkoiCapsicum annuum10.8828.4681.42113forward
CNT3094505Kalanchoe fedtschenkoiSolanum tuberosum14.8222.4283.12154forward
CNT30564216Kalanchoe fedtschenkoiActinidia chinensis8.4739.4685.2388forward
CNT3084834Kalanchoe fedtschenkoiVigna radiata13.0935.3280.88136forward
CNT3075006Kalanchoe fedtschenkoiBrassica juncea15.593681.48162forward
CNT30261201Kalanchoe fedtschenkoiBrassica rapa19.5422.8681.77203forward
CNT30614377Kalanchoe fedtschenkoiArabis alpina11.7447.182.79122forward
CNT30360483Kalanchoe fedtschenkoiLactuca sativa18.6744.2979.9194forward
CNT30154501Kalanchoe fedtschenkoiPrunus persica12.942.9584.33134forward
CNT30570425Kalanchoe fedtschenkoiVitis vinifera21.3712.7781.98222forward
CNT30644515Kalanchoe fedtschenkoiCannabis sativa29.6453.2977.92308forward
CNT3027985Kalanchoe fedtschenkoiTheobroma cacao21.7541.6280.97226forward

Expression of CNT30217087

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MTPEIPPKKNPPVNFSQPSAVWSGSGVFFLPVRVKPGAVDGSPSLKDEIP*

>peptide 2 (39 aa)
MALTVKVETLLQGRALNEEPERPLGAAARILLTVKELVS*

>peptide 3 (54 aa)
MLRMATSPPAANDPAAPANSVFLNGPALTNGPTRKNPCAKPTSTPRRSGLTAVL*

>peptide 4 (29 aa)
RVIDKKCWKLQAVIHIQAHHIPTDKLYLT*

>peptide 5 (36 aa)
MFTIALVIISALKISNLNLKLNFNCRDSKPFRFGWL*

Sequence

>CNT30217087
CAAGGGTAATAGATAAGAAGTGTTGGAAATTACAAGCAGTCATCCATATACAAGCACACCATATCCCAACTGACAAGCTCTACTTGACGTAGTAAGGAAG
GTTAAGGCCGTATAGAAGGAAGTAAGCCCAAATGACTCCAGAGATTCCTCCAAAGAAAAACCCTCCGGTGAACTTTTCCCAGCCCTCTGCAGTCTGGAGC
GGATCCGGGGTCTTCTTCCTCCCGGTCAGAGTCAAACCCGGAGCAGTTGACGGCTCCCCTTCCTTGAAGGATGAAATTCCGTAGATTGTCAAGCAAATGC
TGAGAATGGCCACAAGCCCTCCTGCAGCCAATGATCCTGCGGCGCCCGCAAACTCTGTGTTCCTCAATGGACCAGCCTTGACGAATGGGCCGACGAGGAA
AAACCCGTGTGCCAAACCGACCTCCACACCACGGAGAAGCGGGCTAACGGCCGTCCTGTAGGCGGGCAAGTTGGAGAGGTACCATGCTATCAATGGACTT
GAGGTCACCGGGGTCTCCATTGATTGGTTGAACCACTTGGTAAGTCGGCTGCAAACAAAACAATCACTATCCTGGTCACAGCTATTCAATCCGAAATTCA
CCCATAGGAACTGAACAAATGAATACATTCAAACTCTAGTGACATGTATGACATGAGAGCCCCCAAAGATTCTGAACCAAGCCACAGATGATCTAGTTGT
GTTAGACATAGATCAGTTCAAGGATGTTCACCATTGCCCTTGTTATCATCTCAGCCTTAAAAATTTCTAATCTCAATCTAAAGTTGAACTTTAACTGCAG
AGATAGCAAACCTTTTCGCTTTGGATGGCTTTGACAGTGAAAGTAGAGACCCTTCTGCAAGGAAGGGCCTTGAATGAGGAGCCAGAGAGGCCCCTGGGAG
CAGCAGCAAGGATTCTGTTGACAGTGAAGGAGCTCGTGAGCTGAAGCCATTGATCCTCTCTATTCTCTGTACCAGCTGAGTTGTTCGGTGTTTGTGATTT
TTAGAAGTGTAATAAGAACAGAGGAGGAGATAATAGCAC