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Detailed information on CNT30516978


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39654|PSAL_CUCSA, E-value = 5e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673014Juglans regiaSetaria viridis23.1728.5283.54158forward
CNT30520920Juglans regiaSetaria italica23.1722.883.54158forward
CNT30533721Juglans regiaEucalyptus grandis31.0930.3781.6212forward
CNT30698134Juglans regiaQuercus lobata50.2918.488.34343forward
CNT30376279Juglans regiaArabidopsis thaliana20.3823.3283.45139forward
CNT3021623Juglans regiaCitrullus lanatus45.8923.0578.91313forward
CNT30712228Juglans regiaGlycine max27.2736.5483.87186forward
CNT3042792Juglans regiaPrunus dulcis21.740.1186.49148forward
CNT30635301Juglans regiaCapsicum annuum31.3853.980.37214forward
CNT30182270Juglans regiaSecale cereale22.5827.981.17154forward
CNT30294278Juglans regiaTriticum aestivum22.5835.7381.17154forward
CNT30390478Juglans regiaTriticum turgidum27.8615.9480190forward
CNT30560479Juglans regiaActinidia chinensis29.4719.0984.08201forward
CNT3084834Juglans regiaVigna radiata16.4229.0985.71112forward
CNT30249726Juglans regiaAvena sativa22.5819.280.52154forward
CNT3075006Juglans regiaBrassica juncea14.8122.4483.17101forward
CNT30454500Juglans regiaSaccharum spontaneum17.8933.783.61122forward
CNT30135064Juglans regiaLolium perenne28.333.880.83193forward
CNT3014188Juglans regiaZea mays20.0917.9385.4137forward
CNT30720963Juglans regiaTriticum spelta27.8634.1180190forward
CNT30344813Juglans regiaEragrostis tef20.8227.1583.1142forward
CNT30620323Juglans regiaCajanus cajan29.1811.1484.42199forward
CNT30360483Juglans regiaLactuca sativa14.3722.3783.6798forward
CNT30483616Juglans regiaChara braunii14.662583100forward
CNT30570425Juglans regiaVitis vinifera39.4415.4883.27269forward
CNT30644515Juglans regiaCannabis sativa44.8752.9480.72306forward
CNT3027985Juglans regiaTheobroma cacao48.5360.9680.97331forward
CNT30104607Juglans regiaOryza rufipogon15.429.2583.81105forward
CNT30578384Juglans regiaOryza barthii16.1328.0686.36110forward
CNT30582394Juglans regiaEchinochloa crusgalli12.6123.0687.2186forward
CNT30557050Juglans regiaPanicum hallii17.4531.3284.87119forward
CNT30112090Juglans regiaFicus carica42.0814.0285.02287forward
CNT30726868Juglans regiaLupinus angustifolius21.5517.2386.39147forward

Expression of CNT30516978

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MKENSHILPVTTTNSPTPRSSLFNFSCLQN

Sequence

>CNT30516978
GCGAAGTTGAAATTTCATGCAAAATTAATTGAGAATGCGATGAAAATTCAAATATACAAGTTCACGATGAGGGAAGTCCAAATTTAAAATACAACAATGT
TGGTCACTTAGTATACAATTTTACATTTGCTTCCCAATTAAGACCATGCATGTTGAGACGAGAGACCATTGATGTGGCCGGGGGGAAAAATCACTTGAAG
AAGTAAGGAAGGTCCAAGACATACAGAAGGAAGTAGGCCCAAGTGACACCGGAAATCCCGCCGAAGAAGAACCCACCGGTGAACTTGGCCCATCCGTCGG
CAGTTTGCAGCTGGTCCGGCTCCTTCTTCCGGCCGGTTAGTGTGAGTCCGGGGGCAGTGGATGGTTCTCCCTCGTTGAAGGAGGCAATGCCATACATTGT
CAAGCAGATGCTAAGAATAACAATAAGGCCAGCAGCACCCAGAGACCCGGCTCCCCCAGCATAAGGGGTGTTCCTCAGAGGTCCAGTCTTGACGAATGGT
CCAACAAGGAGGAATCCATGGGCTAGGCTTCCAATGAATGGGTCACCGTTGATGGGTTGAATAACTTGGAAAGTTGGCTGCAAAGTAAATCCATGAAAGA
AAATAGTCATATCTTACCAGTTACCACTACAAATTCACCTACTCCAAGAAGCAGCCTTTTCAATTTCTCATGTCTACAAAAC