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Detailed information on CNT30376279


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SUI4|PSAL_ARATH, E-value = 1e-70

BLAST vs NONCODE:
NONBNAT000915, E-value = 2e-80

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533721Arabidopsis thalianaEucalyptus grandis62.7553.5878.07374forward
CNT30516978Arabidopsis thalianaJuglans regia23.3220.3883.45139forward
CNT30698134Arabidopsis thalianaQuercus lobata24.337.7883.45145forward
CNT30730016Arabidopsis thalianaCorchorus capsularis20.1318.1386.67120forward
CNT3042792Arabidopsis thalianaPrunus dulcis24.539.5782.19146forward
CNT30635301Arabidopsis thalianaCapsicum annuum26.5139.884.18158forward
CNT3094368Arabidopsis thalianaSolanum tuberosum17.4540.1585.58104forward
CNT30560479Arabidopsis thalianaActinidia chinensis23.1513.1183.33138forward
CNT30238125Arabidopsis thalianaBrassica oleracea20.4710.4191.8122forward
CNT30172489Arabidopsis thalianaTrifolium pratense34.916.1482.69208forward
CNT3075006Arabidopsis thalianaBrassica juncea60.48085360forward
CNT30261201Arabidopsis thalianaBrassica rapa38.5925.989.13230forward
CNT30614377Arabidopsis thalianaArabis alpina24.6656.7695.92147forward
CNT30217087Arabidopsis thalianaKalanchoe fedtschenkoi37.5821.5680.36224forward
CNT30360483Arabidopsis thalianaLactuca sativa52.5271.4681.47313forward
CNT30570425Arabidopsis thalianaVitis vinifera31.5410.8284.04188forward
CNT30644515Arabidopsis thalianaCannabis sativa30.731.6681.42183forward
CNT3027985Arabidopsis thalianaTheobroma cacao23.3225.689.21139forward
CNT30582394Arabidopsis thalianaEchinochloa crusgalli16.9527.0883.17101forward
CNT30112090Arabidopsis thalianaFicus carica23.496.8481.43140forward
CNT30725036Arabidopsis thalianaLupinus angustifolius25.8423.9185.06154forward

Expression of CNT30376279

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MGQAHFHTAEERVDGGTVSREEETLLVGETPKGAPEMPFGTARR*

>peptide 2 (91 aa)
HSIYFDLHLLDEVRKVKNVEKEVSPSHPRDPSKEESSSELSPSISRLKLVRLLLPPSQSQTRCDRWLSFLERRDTVDGEAHAEDDYQPSRG*

Sequence

>CNT30376279
CACTCGATATATTTTGATCTACATTTACTTGACGAAGTAAGGAAGGTCAAGAACGTAGAGAAGGAAGTAAGCCCAAGTCACCCCAGAGATCCCTCCAAAG
AAGAATCCTCCAGTGAACTTAGCCCATCCATCAGCCGTTTGAAGCTGGTCAGGCTGCTTCTTCCGCCCAGTCAAAGTCAAACTCGGTGCGATCGATGGCT
CTCCTTCCTTGAAAGAAGAGATACCGTAGATGGTGAGGCACATGCTGAGGATGACTACCAGCCCAGCCGCGGCTAAAGACCCGGCTGACCCGGCGTAAGC
AGTGTTCCTTAATGGGCCAGCTTTGACGAATGGGCCCACTAAGAAGAAACCATGGGCCAGGCCCACTTCCACACCGCGGAGGAGAGGGTTGACGGCGGTA
CGGTATCCAGGGAGGAAGAGACTCTTTTGGTCGGAGAAACACCGAAAGGAGCACCGGAGATGCCCTTCGGGACGGCGAGACGCTGAGAAAGAGAAGCGGA
GGAGAAGCTGCTCCTTAGCTGGCTCGCCATTGGAGATGCACTCGCTGCCATTGTTCTTTTTGTCTTGGTTGTTCTCTTATGAAAATTAAAATAAAA