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Detailed information on CNT3094038


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698134Solanum tuberosumQuercus lobata42.0514.0680.53262forward
CNT30507461Solanum tuberosumNicotiana attenuata53.9392.8288.1336forward
CNT30635301Solanum tuberosumCapsicum annuum53.6184.1392.51334forward
CNT30564215Solanum tuberosumActinidia chinensis11.8828.0385.1474forward
CNT3075006Solanum tuberosumBrassica juncea14.7720.4483.792forward
CNT30614377Solanum tuberosumArabis alpina11.427.4188.7371forward
CNT30360483Solanum tuberosumLactuca sativa34.5149.0983.26215forward
CNT30644515Solanum tuberosumCannabis sativa42.0545.3381.3262forward
CNT3027985Solanum tuberosumTheobroma cacao38.6844.3880.91241forward

Expression of CNT3094038

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MNQLPLHTMGRVHHLFYIHKKKLTLYIKCNFPTKEVQTNPLPPLLVVTC*

>peptide 2 (30 aa)
MLRITTSPAAANEPAPPAYNGSGSSSILYT*

Sequence

>CNT3094038
AGTCAAGTCATTTAAAAGGTCACTAAAGATAACTACAAGTTATAAAGAATAAGACAAGTAACTCATTACAACGAGTTAAATTGCACTCCTCCAAGAGCTT
AGTAGTTCAATATACATCTTTCATATCCAATTTAACATTCAAAATAGTTACATCAATTAAAGAAATTTACTTAACAAAGTAAGGAAGATCAAGAACATAT
AGGAGGAAATAAGCCCAAGTGACACCAGAAATTCCACCAAAAAAGAATCCACCAGTGAATTTAGCCCATCCATCTGCAGTTTGCAATTGATCTGGTACTT
TTTTCCTACCAGTTAATGTTAATGCTGGTGCTGTTGATGGATCTCCTTCTTTGAATGATGAAATTCCATAAATTGTCAAACACATGCTAAGGATCACTAC
AAGTCCTGCTGCTGCCAATGAACCAGCTCCCCCTGCATACAATGGGTCGGGTTCATCATCTATTTTATATACATAAAAAAAAATTGACCTTATATATAAA
GTGTAATTTTCCGACAAAGGAGGTTCAGACGAATCCCCTTCCGCCCCTACTTGTAGTAACATGTTAGTTAACAGCATATAGAACTCAAACTCTATGTGTA
AAAATTGAAACTAGGAATTGGGC